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Microbiology 142 (1996), 675-684; DOI  10.1099/13500872-142-3-675
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A Protein having Similarity with Methylmalonyl-CoA Mutase is Required for the Assimilation of Methanol and Ethanol by Methylobacterium extorquens AM1

Loraine M. Smith1,2, Wim G. Meijer2, Lubbert Dijkhuizen2 and Pat M. Goodwin1,{dagger},*

1School of Cell and Molecular Biology, NESCOT, Reigate Road, Epsom KT17 3DS, UK
2Department of Microbiology, Groningen Biomolecular Sciences and Biotechnology Institute (GBB), University of Groningen, Kerklaan 30, 9751 NN Haren, The Netherlands

* Author for correspondence: Pat M. Goodwin. Tel: +44 171 611 8690. Fax: +44 171 611 8363. e-mail: p.goodwin@wellcome.ac.uk

ABSTRACT

A 4.0 kb region of Methylobacterium extorquens AM1 DNA which complements three mutants unable to convert acetyl-CoA to glyoxylate (and therefore defective in the assimilation of methanol and ethanol) has been isolated and sequenced. It contains two ORFs and the 3'-end of a third one. The mutations in all three mutants mapped within the first ORF, which was designated meaA; it encodes a protein having similarity with methylmalonyl-CoA mutase. However, methylmalonyl-CoA mutase was measured in extracts of one of the mutants and the specific activity was found to be similar to that in extracts of wild-type cells. Furthermore, although the predicted meaA gene product has the proposed cobalamin-binding site, it does not contain a highly conserved sequence (RIARNT) which is present in all known methylmalonyl-CoA mutases; meaA may therefore encode a novel vitamin-B12-dependent enzyme. The predicted polypeptide encoded by the second ORF did not have similarity with any known proteins. The partial ORF encoded a protein with similarity with the 3-oxoacyl-[acyl-carrier-protein] reductases; it was not essential for growth on methanol or ethanol.


Keywords: Methylobacterium, methanol, mutase, serine pathway, C1 assimilation

{dagger} Present address: The Wellcome Trust, 183 Euston Road, London NW1 2BE, UK.




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