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β-Tubulin genes and the basts for benzimidazole sensitivity of the opportunistic fungus Cryptococcus neoformans

Department of Microbiology and Immunology, MCP Hahnemann School of Medicine, Allegheny University of the Health Sciences, 2900 Queen Lane, Philadelphia, PA 19129, USA

Author for correspondence: Thomas Edlind. Tel: +1 215 991 8377. Fax: +1 215 848 2271. e-mail: edlind@allegheny.edu

ABSTRACT

The basidiomycete Cryptococcus neoformans causes life-threatening infections in immunocompromised patients, and available chemotherapeutic agents are potentially toxic or have limited efficacy. In vitro, C. neoformans is very sensitive to selected benzimidazole compounds (e.g. albendazole), which act by disrupting microtubules through binding to the β-tubulin subunit. To understand the basis for this benzimidazole sensitivity, we have characterized C. neoformans β-tubulin genes and their expression. Analysis of PCR amplification products, genomic and cDNA clones and Southern blots identified two β-tubulin genes. TUB1 contains seven introns, including one that splits the start codon, and encodes a 447 amino acid protein with >80% identity to most other β-tubulins. A partial sequence of TUB2 revealed a higher density of introns and a considerably more divergent β-tubulin. The relative expression of TUB1 to TUB2 determined by reverse-transcription PCR was about 3:1, consistent with a more limited role for the TUB2 product. Comparisons of β-tubulin sequences from C. neoformans and from various benzimidazole-sensitive and -resistant organisms strongly suggest that the TUB1 product represents the primary benzimidazole target. This was supported by the identification of a His6 to Gin change in TUB1 from three independently isolated albendazole-resistant mutants.

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