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Microbiology 148 (2002), 133-146
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Microbiology (2002), 148, 133-146.
© 2002 Society for General Microbiology


Research Paper

AcnC of Escherichia coli is a 2-methylcitrate dehydratase (PrpD) that can use citrate and isocitrate as substrates

Lindsay Blank1, Jeffrey Green1 and John R. Guest1

The Krebs Institute for Biomolecular Research, Department of Molecular Biology and Biotechnology, University of Sheffield, Western Bank, Sheffield S10 2TN, UK1

Author for correspondence: John R. Guest. Tel: +44 114 2224406. Fax: +44 114 2728697. e-mail: j.r.guest{at}sheffield.ac.uk

Escherichia coli possesses two well-characterized aconitases (AcnA and AcnB) and a minor activity (designated AcnC) that is retained by acnAB double mutants and represents no more than 5% of total wild-type aconitase activity. Here it is shown that a 2-methylcitrate dehydratase (PrpD) encoded by the prpD gene of the propionate catabolic operon (prpRBCDE) is identical to AcnC. Inactivation of prpD abolished the residual aconitase activity of an AcnAB-null strain, whereas inactivation of ybhJ, an unidentified acnA paralogue, had no significant effect on AcnC activity. Purified PrpD catalysed the dehydration of citrate and isocitrate but was most active with 2-methylcitrate. PrpD also catalysed the dehydration of several other hydroxy acids but failed to hydrate cis-aconitate and related substrates containing double bonds, indicating that PrpD is not a typical aconitase but a dehydratase. Purified PrpD was shown to be a monomeric iron–sulphur protein (Mr 54000) having one unstable [2Fe–2S] cluster per monomer, which is needed for maximum catalytic activity and can be reconstituted by treatment with Fe2+ under reducing conditions.

Keywords: aconitase, iron–sulphur proteins, propionate metabolism, YbhJ

Abbreviations: Acn, aconitase; c-Acn, cytoplasmic aconitase; mit-Acn, mitochondrial aconitase; AcnC, the residual Acn activity of an AcnAB-null strain; IRP, iron regulatory protein; PrpD, 2-methylcitrate dehydratase; UTR, untranslated region




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