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Microbiology 149 (2003), 2119-2128; DOI  10.1099/mic.0.26311-0
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Microbiology 149 (2003), 2119-2128; DOI  10.1099/mic.0.26311-0
© 2003 Society for General Microbiology

DNA ligase IV from a basidiomycete, Coprinus cinereus, and its expression during meiosis

Satoshi Namekawa1, Yosuke Ichijima2, Fumika Hamada1, Nobuyuki Kasai1, Kazuki Iwabata1, Takayuki Nara1,{dagger}, Hirobumi Teraoka2, Fumio Sugawara1 and Kengo Sakaguchi1

1 Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda-shi, Chiba-ken 278-8510, Japan
2 Department of Pathological Biochemistry, Medical Research Institute, Tokyo Medical and Dental University, Chiyoda-ku, Tokyo 101-0062, Japan

Correspondence
Kengo Sakaguchi
kengo{at}rs.noda.tus.ac.jp

DNA ligase IV is thought to be involved in DNA double-strand break repair and DNA non-homologous end-joining pathways, but these mechanisms are still unclear. To investigate the roles of DNA ligase IV from a biologically functional viewpoint, the authors studied its relationship to meiosis in a basidiomycete, Coprinus cinereus, which shows a highly synchronous meiotic cell cycle. The C. cinereus cDNA homologue of DNA ligase IV (CcLIG4) was successfully cloned. The 3·2 kb clone including the ORF encoded a predicted product of 1025 amino acid residues with a molecular mass of 117 kDa. A specific inserted sequence composed of 95 amino acids rich in aspartic acid and glutamic acid could be detected between tandem BRCT domains. The inserted sequence had no sequence identity with other eukaryotic counterparts of DNA ligase IV or with another aspartic acid and glutamic acid rich sequence inserted in C. cinereus proliferating cell nuclear antigen (CcPCNA), although the length and the percentages of aspartic and glutamic acids were similar. In addition, the recombinant CcLIG4 protein not only showed ATP-dependent ligase activity, but also used (dT)16/poly(dA) and (dT)16/poly(rA) as substrates, and had double-strand ligation activity, like human DNA ligase IV. Northern hybridization analysis and in situ hybridization indicated that CcLIG4 was expressed not only at the pre-meiotic S phase but also at meiotic prophase I. Intense signals were observed in leptotene and zygotene. Based on these observations, the possible role(s) of C. cinereus DNA ligase IV during meiosis are discussed.


Abbreviations: DSB, DNA double-strand break; MMS, methyl methanesulfonate; NaPPi, sodium pyrophosphate; NHEJ, non-homologous end-joining; PCNA, proliferating cell nuclear antigen

The GenBank accession number for the sequence of CcLIG4 is AB098474.

{dagger}Present address: Department of Food Science and Human Nutrition, University of Illinois at Urbana-Champaign, Urbana, IL 61801, USA.




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S. H. Namekawa, K. Iwabata, H. Sugawara, F. N. Hamada, A. Koshiyama, H. Chiku, T. Kamada, and K. Sakaguchi
Knockdown of LIM15/DMC1 in the mushroom Coprinus cinereus by double-stranded RNA-mediated gene silencing
Microbiology, November 1, 2005; 151(11): 3669 - 3678.
[Abstract] [Full Text] [PDF]




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