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Microbiology 151 (2005), 813-823; DOI  10.1099/mic.0.27364-0
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Microbiology 151 (2005), 813-823; DOI  10.1099/mic.0.27364-0
© 2005 Society for General Microbiology

Identification of the DNA-binding site of the Rgg-like regulator LasX within the lactocin S promoter region

Elizabeth L. Andersen Rawlinson{dagger}, Ingolf F. Nes and Morten Skaugen{ddagger}

Laboratory of Microbial Gene Technology, PO Box 5003, Norwegian University of Life Sciences, N-1432 Ås, Norway

Correspondence
Morten Skaugen
morten.skaugen{at}umb.no

LasX regulates the transcription of the divergent operons lasXY and lasAW, which specify the production of lactocin S in Lactobacillus sakei L45. Using histidine-tagged LasX, and a DNA fragment containing the complete intergenic lasAlasX region, electrophoresis mobility-shift (EMSA) analyses were employed to demonstrate that LasX binds to the lasA–lasX intergenic DNA. Two direct heptanucleotide motifs directly upstream of PlasA–W, and a third imperfect copy of this motif, overlapping the –10 element of PlasA–W, were identified as possible LasX-binding sites. To assess the role of the direct repeats in the binding of LasX to the intergenic lasA–lasX region, binding experiments were performed using DNA probes with different combinations of the repeats, and with arbitrarily chosen repeat substitutions. The result of these experiments demonstrated that only the middle repeat was required for the binding of LasX to the las-promoter region. This observation correlated with the results of subsequent reporter-gene analyses, thereby weakening the hypothesis of the involvement of the direct repeats in LasX-mediated transcription regulation. By analysing the ability of LasX to bind successively shortened derivatives of the original intergenic fragment, a tentative 19 bp minimum LasX-binding site was identified.


Abbreviations: EMSA, electrophoretic mobility-shift assay; UTR, untranslated region

{dagger}Present address: Norwegian Defence Research Establishment, PO Box 25, N-2027 Kjeller, Norway.

{ddagger}Present address: Department of Chemistry, Biotechnology and Food Science, Agricultural University of Norway, PO Box 5003, N-1432 Ås-NLH, Norway.




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