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1 Department of Chemistry and Biochemistry, University of California, San Diego, 9500 Gilman Drive, La Jolla, CA 92093, USA
2 School of Biotechnology and Biomolecular Sciences, University of New South Wales, Sydney, NSW 2052, Australia
3 Centre for Marine Biofouling and Bio-innovation, University of New South Wales, Sydney, NSW 2052, Australia
4 Max-Planck-Institute for Marine Microbiology, Celsiusstraße 1 28359, Bremen, Germany
Correspondence
Staffan Kjelleberg
s.kjelleberg{at}unsw.edu.au
| ABSTRACT |
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The GenBank/EMBL/DDBJ accession numbers for the sequences reported in this paper are AY695819 and ZP_01133305ZP_01133315.
Present address: School of Biological Sciences, University of Southampton, Southampton SO16 7PX, UK.
| INTRODUCTION |
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Many species of the genus Pseudoalteromonas have been found to produce bioactive compounds against different classes of fouling organisms and are frequently found in association with the surfaces of living marine eukaryotes (Holmström & Kjelleberg, 1999
). A well-studied surface-associated bacterium is Pseudoalteromonas tunicata. This green-pigmented bacterium was first isolated from the surface of a tunicate, Ciona intestinalis, in Sweden (Holmström et al., 1998
) and later from a green alga, Ulva australis (formally Ulva lactuca), in Australian waters (Egan et al., 2001a
). P. tunicata produces a number of extracellular bioactive compounds, each of which has a specific inhibitory activity against target organisms such as algal spores, fungi, invertebrate larvae or bacteria (Egan et al., 2001b
; Holmström et al., 1992
, 2002
; James et al., 1996
). While several studies have addressed the production of bioactive compounds, no data have so far been reported on the means by which P. tunicata colonizes surfaces, including those of higher marine organisms. Investigation of such mechanisms will contribute to a greater understanding of the ecology of P. tunicata and its interaction with marine surfaces.
The successful colonization of surfaces by bacteria is often mediated by cell-surface appendages such as pili and flagella. For example, the attachment of Escherichia coli to abiotic surfaces is promoted by the presence of both type 1 pili and flagella (O'Toole & Kolter, 1998
). In Pseudomonas aeruginosa, flagella are believed to be important for initial attachment to a surface, while type 4 pili promote the formation of microcolonies on the surface (O'Toole & Kolter, 1998
). It has also been reported that type 4 pili mediate attachment of pathogenic bacteria such as Neisseria gonorrhoeae (Morand et al., 2001
) and Pseudomonas aeruginosa (Zolfaghar et al., 2003
) to host epithelial cells. The adherence of Vibrio cholerae to environmental surfaces is directly associated with the presence of the mannose-sensitive haemagglutinin (MSHA) pilus, which belongs to a family of type 4 pili (Marsh & Taylor, 1999
). In V. cholerae, the MSHA pilus has been demonstrated to play a direct role in both colonization and subsequent biofilm formation on abiotic as well as biotic surfaces (Chiavelli et al., 2001
; Watnick et al., 1999
; Watnick & Kolter, 1999
).
Here we describe a non-piliated mutant of P. tunicata (SM5) that carries a transposon insertion in an ORF termed mshJ, with high homology to the V. cholerae mshJ, a gene encoding a MSHA pilus biogenesis protein. DNA sequencing upstream and downstream of mshJ revealed the presence of a gene locus with 17 ORFs that are homologous to the MSHA pilus biogenesis gene locus of V. cholerae, and we propose that this gene locus is involved in the assembly and transport of an MSHA pilus in P. tunicata. Here we demonstrate a role for the P. tunicata MSHA pilus in attachment to abiotic, as well as biotic (U. australis) surfaces, and propose that P. tunicata demonstrates surface sensing mechanisms as revealed by increased pilus production in the presence of cellulose, one of the major surface polymers of U. australis.
| METHODS |
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P. tunicata wild-type cells were provided with a green fluorescent protein (GFP) colour tag by transconjugation using the constitutive GFP expression plasmid pCJS10. This plasmid contains the gfpmut3 gene (Cormack et al., 1996
) on an RSF1010 backbone from broad-host-range vector pHRP304 (Bagdasarian et al., 1981
). In addition, a red fluorescent protein (RFP) colour tag was provided to SM5 cells using the pCJS10-derived plasmid pCJS10R. This plasmid contains the RFP gene dsred (Clontech) in place of gfpmut3 on pCJS10 (Rao et al., 2005
). Triparental conjugations were carried out as described previously for P. tunicata (Egan et al., 2002a
) and labelled transconjugants were grown on VNSS agar plates containing 15 µg chloramphenicol ml1 and 100 µg streptomycin ml1. GFP- and RFP-labelled strains showed bright fluorescence after overnight culture and we observed no differences in the growth rate or surface attachment properties of the labelled strains versus the unlabelled parent strain (data not shown).
Panhandle PCR, DNA sequencing and sequence analysis.
To obtain sequence information from the genes disrupted by the mini-Tn10 transposon in the SM5 mutant, panhandle PCR was carried out as described previously using adaptor-specific primer AP1 (5'-GGATCCTAATACGACTCACTATAGGGC-3') and transposon-specific primers Tn10C (5'-GCTGACTTGACGGGACGGCG-3') and Tn10D (5'-CCTCGAGCAAGACGTTTCCCG-3') (Egan et al., 2002a
, b
). Panhandle PCR products were visualized in 1 % agarose gel and purified using a PCR purification kit (Qiagen), according to the manufacturer's instructions. PCR products were sequenced using transposon-specific primers Tn10C and Tn10D and a primer walking strategy. For sequencing, between 50 and 100 ng double-stranded template DNA, 1 µl specific primer (10 pmol), 4 µl CSA buffer and 4 µl BigDye terminator cycle sequencing reaction mix (Applied Biosystems) were mixed in a final volume of 20 µl. Amplification of DNA was conducted using the following parameters: 94 °C for the initial denaturation step which was followed by 25 cycles of 94 °C for 10 s, 50 °C for 5 s and 60 °C for 4 min. After cycling, the sequencing mixture was cleaned and purified using a butanol purification protocol (Tillett & Neilan, 1999
). Separation of sequencing products was performed on an ABI 377 DNA sequencing system at the Sydney University Prince Alfred Macromolecular Analysis Centre (SUPAMAC). The DNA sequence electropherograms were analysed with ABI-PRISM software. Multiple sequence alignments were performed using the Staden Package System (Medical Research Council Laboratory of Molecular Biology, University of Cambridge). The complete consensus DNA sequence was compared with sequences in the GenBank database using the BLAST-search algorithm (Altschul et al., 1990
) and ORFs were defined using the ORF finder program made available through the National Center for Biotechnology Information (NCBI) website (www.ncbi.nlm.nih.gov). Promoter prediction was performed using the neural network promoter prediction tool (Reese, 2001
) available though the Berkley Drosophila genome project website (www.fruitfly.org/seq_tools/promoter.html). The GCG software package provided by the Australian National Genomic Information Service (ANGIS) website (www.angis.org.au/WebANGIS/) and the ExPASy (Expert Protein Analysis System) site (http://expasy.proteome.org.au/index.html) of the Swiss Institute of Bioinformatics (SIB) were also used for sequence analysis. Additional sequence information was obtained by analysis of the draft genome sequence for P. tunicata using the BLAST-search algorithm (Altschul et al., 1990
).
Transmission electron microscopy (TEM).
Cell surface morphology of P. tunicata wild-type and SM5 strains was examined using TEM. Bacterial cells were grown on VNSS plates for 24 h (equivalent to the stationary phase of growth) and colonies were gently resuspended in PBS, pH 7.4 (l1: 8.00 g NaCl, 0.20 g KCl, 1.44 g Na2HPO4, 0.24 g KH2PO4) to a concentration of 106 cells ml1. Alternatively, bacterial cells were grown in static conditions in NSS liquid medium containing either glucose, cellobiose or cellulose as the sole carbon source. Carbon and Formvar-coated copper grids were placed on a drop of cell suspension for 5 min and then negatively stained with 2 % phosphotungstic acid for 30 s. The cells were examined using a Hitachi H7000 transmission electron microscope.
Haemagglutination assay.
Haemagglutination assays were performed as described by Gardel & Mekalanos (1996)
. Bacterial strains were grown in VNSS medium at 28 °C under static conditions and assayed during both exponential and stationary growth phases. Briefly, the cells were washed twice and resuspended in KrebsRinger solution (KRT). An initial concentration of 1010 cells ml1 was serially diluted in 96-well microtitre plate with each well containing 100 µl 3 % (v/v) washed horse erythrocyte suspension. The mixture was incubated at room temperature for 30 min and scored for haemagglutination. V. cholerae strain M1615 was used as a positive control. To determine if pili are sensitive to the presence of mannose during the haemagglutination assay, 50 µl 1 %
-methyl-D-mannoside (a non-metabolizable derivative of mannose) were added to the haemagglutination mixture. The haemagglutination assay for each strain was carried out in three replicates.
Attachment assays.
The attachment of the P. tunicata wild-type and the SM5 mutant strains to abiotic surfaces was tested by modifying an attachment assay described by O'Toole & Kolter (1998)
. Bacterial isolates were grown under static conditions at 28 °C on VNSS medium and harvested after 24 h. The cell suspension was centrifuged (6000 g, 5 min), washed twice and resuspended in 10 ml PBS, pH 7.4, to an OD600 of 0.60.7. Aliquots (1 ml) of cell suspension were added to wells of a 24-well polystyrene microtitre plate. The plate was shaken slowly for 1 h at room temperature. Wells were then washed twice using sterile distilled water and air-dried for 45 min. The attached cells were fixed at 80 °C for 30 min and stained with 0.1 % crystal violet for 45 min. The cells were de-stained with 95 % ethanol and quantified by measuring OD590.
We examined attachment of GFP-labelled P. tunicata wild-type and RFP-labelled SM5 cells to microcrystalline cellulose. Attachment was monitored essentially as described by Bayer et al. (1983)
and by direct confocal laser scanning microscopic (CLSM) imaging of fluorescent cells attached to cellulose particles. Cells grown using glucose or cellobiose were harvested after 24 h and cells grown using cellulose were harvested after 48 h. The cells were then gently washed twice with PBS (centrifugation at 5000 g for 10 min) and resuspended in 10 ml PBS solution. The assay mixture consisted of 1 ml cells (
107 cells ml1) (pre-grown in glucose, cellobiose or microcrystalline cellulose), 1 ml 20 % microcrystalline cellulose in PBS and 1 ml PBS. The mixture was shaken slowly for 1 h and incubated statically for 1 h at room temperature. The OD400 of the suspension was measured and compared to a control (identical cell suspension in PBS). To test the effect of mannose in the attachment of cells to cellulose, the attachment assay mixture was added with 100 mM
-methyl-D-mannoside. The attachment assay for each strain was carried out in three replicates. The samples were mounted on a glass microscope slide and transmission fluorescent images were captured using an Olympus LSMGB200 confocal laser scanning microscope.
Preparation of axenic thallus of green alga U. australis and culture conditions.
Axenic thallus of U. australis was obtained following the protocol of Rao et al. (2006)
. Briefly, plants of U. australis were collected from rocks at Clovelly Bay, Sydney, Australia. The collected plants were rinsed with 50 ml autoclaved sea water and thallus discs of around 0.6 cm diameter were excised from the lower part of U. australis by using a steel punch. To remove other bacteria from the surface of U. australis, surfaces of U. australis discs were swabbed with sterile cotton tips and exposed to 0.012 % (v/v) NaOCl for 5 min. Plant pieces were incubated in an antibiotic mixture containing 300 mg ampicillin l1, 30 mg polymyxin l1 and 60 mg gentamicin l1 for 24 h followed by 1 h recovery in 20 ml sterile sea water.
Attachment assay with axenic U. australis.
GFP-tagged P. tunicata wild-type and SM5 mutant strains were grown on VNSS medium containing chloramphenicol for 24 h. After 24 h the cell suspensions were centrifuged at 6000 g for 7 min. The bacterial cells were rinsed twice with 10 ml PBS and resuspended in PBS to an OD610 of 0.350.45. The assay mixture consisted of 1 ml washed cells, one axenic thallus disc of U. australis and 1 ml PBS. The mixture was incubated for a period of 2 h with slow shaking and for 1 h without shaking at room temperature. The U. australis pieces were rinsed twice with 10 ml PBS to remove unattached cells. For each sample, 10 images were manually analysed by counting the bacteria attached to the surface using CLSM. The attachment assay was repeated four times with three replicates for each bacterial strain.
| RESULTS |
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70 promoter and match closely with other predicted promoter sequences for P. tunicata (Egan et al., 2002a
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The attachment of P. tunicata wild-type and SM5 mutant cells to cellulose was also tested. Cellulose is a major surface polymer of C. intestinalis (De Leo et al., 1977
) and U. australis (Chapman, 1979
), and P. tunicata is frequently isolated from these surfaces. P. tunicata wild-type cells (grown with glucose as the carbon source) demonstrated attachment to microcrystalline cellulose which resulted in a 22.2 % reduction in the final OD400 of the assay mixture (Fig. 3
). SM5 mutant cells, however, attached less effectively to cellulose showing only 4 % reduction. Moreover, attachment of wild-type P. tunicata was enhanced when cells were pre-grown on cellulose and cellobiose (29.4 and 40.7 % reduction, respectively). SM5 mutant cells pregrown in cellobiose and cellulose showed 26.7 and 14.5 % reduction of the final OD400 of the assay mixture, respectively. It was also demonstrated that mannose significantly inhibits attachment of P. tunicata wild-type cells to cellulose, displaying only 3.7 % reduction of the final OD400 of the attachment assay mixture.
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| DISCUSSION |
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This study describes a gene locus proposed to be involved in the export and assembly of an MSHA pilus in P. tunicata. We have sequenced the DNA flanking a Tn10-disrupted ORF with high homology to mshJ of V. cholerae (Marsh & Taylor, 1999
), and together with analysis of the flanking region in the recently obtained draft genome of P. tunicata, revealed 17 contiguous ORFs (mshI1I2JKLMNEGFBACDOPQ) with similar genetic organization and high homology to MSHA pili biogenesis and secretory proteins of various Gram-negative bacteria, including Pseudoalteromonas haloplanktis, Shewanella baltica, V. cholerae, Vibrio parahaemolyticus and Vibrio vulnificus. The best characterized MSHA pilus gene locus is that of V. cholerae El Tor (Marsh & Taylor, 1999
). The 17 P. tunicata ORFs identified in this study share major similarities with the MSHA pili secretory and structural genes of V. cholerae, including (1) homology of the predicted amino acid sequences, (2) similarity of the predicted location of the gene products, (3) similarity in their organization, orientation and arrangement, and (4) the presence of polycistronic genes, where overlapping stop and start codons of ORFs have been identified.
TEM studies revealed the presence of flexible pili on the cell surface of P. tunicata, with ultrastructural characteristics similar to pili of other Gram-negative bacteria. In contrast, the P. tunicata SM5 mutant, disrupted in the MSHA gene locus, showed no expression of pili on the cell surface. Biogenesis of pili requires numerous gene products, including a structural prepilin subunit, ancillary proteins with prepilin-like leader sequences, inner- and outer-membrane proteins and nucleotide-binding proteins (Alm & Mattick, 1997
). It has been reported that a mutation in any of these genes is sufficient to prevent the assembly of functional pili (Strom & Lory, 1993
). For example, mutation of any one of the secretory genes pilO, pilP or pilQ in Pseudomonas aeruginosa resulted in loss of pili, confirming the importance of these mutated genes in pilus biogenesis (Martin et al., 1995
). These secretory genes belong to an operon for secretion and export which includes two other genes (pilM and pilN) required in the biogenesis of fimbriae in Pseudomonas aeruginosa (Martin et al., 1995
). In V. cholerae, it has been reported that the expression of MSHA to form functional pili on the bacterial surface is completely dependent on the transcription and expression of two operons: secretory and structural (Martin et al., 1995
). Deletion in any of the putative promoter regions upstream of mshI, a secretory gene, or mshB, a structural gene, abolished MSHA pilus assembly, secretion and expression (Martin et al., 1995
). Additionally, mutation in mshE, a secretory gene in the MSHA biogenesis locus, showed abolished haemagglutination (Hase et al., 1994
). The fact that the P. tunicata SM5 mutant displayed a non-piliated phenotype and was unable to mediate haemagglutination suggests that the MSHA gene locus is required for pilus biogenesis in P. tunicata.
Gram-negative bacteria bind to surfaces via the tip adhesins of the pili (Strom & Lory, 1993
). These adhesins may have different specific receptors. For example, V. cholerae El Tor strains express a haemagglutinin pilus with a preference for mannose receptors (Jonson et al., 1991
). We have demonstrated that the P. tunicata pilus causes haemagglutination of horse red blood cells. As for V. cholerae El Tor, the clumping of red blood cells was abolished in the presence of mannose.
The MSHA pili expressed by V. cholerae cells are known to be involved in the attachment to and colonization of surfaces. The MSHA pilus is an important attachment factor in aquatic environments and has been shown to mediate attachment to solid substrates (Chiavelli et al., 2001
; Watnick et al., 1999
). It was reported that the V. cholerae El Tor MSHA mutant strain is unable to form biofilms and shows decreased adherence to abiotic and biotic surfaces (Watnick et al., 1999
). In this study, we first tested attachment of P. tunicata wild-type and SM5 mutant cells to polystyrene and to cellulose, the surface polymer of U. australis and C. intestinalis from which P. tunicata has been isolated. The SM5 mutant cells showed less attachment to both polystyrene and cellulose surfaces, in comparison with the piliated wild-type strain. This suggests a key role for the P. tunicata MSHA pilus in the attachment to both surfaces.
To determine if the MSHA pilus is involved in mediating the attachment of P. tunicata cells to living surfaces we compared the ability of the piliated and non-piliated strains to attach directly to the surface of the green alga U. australis. The attachment assays revealed significantly higher numbers of attached P. tunicata wild-type cells compared to SM5 mutant cells at the surface of U. australis. However, a small number of SM5 cells did attach to the algal surface, suggesting that other mechanisms may be involved in the adhesion of P. tunicata to the surface of U. australis (for example non-specific physicochemical interactions between the bacterial cell and plant surface). Nevertheless, our findings indicate that the MSHA pilus is a major determinant for attachment of P. tunicata to U. australis.
This study also showed that specific growth conditions affect the expression of the P. tunicata MSHA pilus. P. tunicata cells grown in cellulose or cellobiose were found to be hyperpiliated when examined under TEM. These specific substrates also promote attachment of P. tunicata to cellulose. We observed that wild-type cells pregrown in cellulose or cellobiose displayed enhanced attachment to cellulose compared to cells grown on other carbon sources (a smaller increase in adhesion to cellulose of the SM5 mutant grown in cellulose or cellobiose was also observed, although the reason for this is unclear). These studies indicate that cellulose or cellobiose may serve as environmental signals which induce expression of the MSHA pilus and thus promote attachment of P. tunicata to cellulose-containing surfaces. Our findings concur with previous reports that chemosensory mechanisms can control pilus expression. In Pseudomonas aeruginosa, expression of pilA is controlled by a two-component sensorregulator gene pair, pilS and pilR (Hobbs et al., 1993
). The PilS protein is a sensor protein located upstream of the regulator protein PilR, thought to be responsible for sensing unknown environmental signals (Boyd, 2000
). In V. cholerae, the response of tcp (toxin-coregulated pili) genes to environmental stimuli is mediated by the ToxR regulon (Strom & Lory, 1993
). The ToxR protein is a major sensor and regulator protein that transmits signals from the periplasmic side of the inner membrane and regulates transcription of virulence factors, including the toxin-coregulated pili. Interestingly, a putative transcriptional regulator, WmpR with homology to ToxR has been identified in P. tunicata (Egan et al., 2002b
). This gene is involved in the regulation of the expression of antifouling compounds in P. tunicata (Egan et al., 2002b
). The P. tunicata wmpR mutant is devoid of pili on its surface when examined using TEM (data not shown). It is possible that the regulatory activity of wmpR may explain the surface-sensing mechanisms demonstrated by P. tunicata in response to environmental stimuli. In the marine ecosystem, the P. tunicata wmpR gene product may sense an environmental signal (e.g. cellulose or surface polymers of C. intestinalis and U. australis) and respond by increasing the expression of MSHA pili on the cell surface, hence promoting the attachment of P. tunicata to the surfaces of these marine organisms.
In summary, we have identified a gene locus (mshI1I2JKLMNEGFBACDOPQ) with similar genetic organization and high homology to MSHA pilus biogenesis operons of marine vibrios, and have shown that the msh gene locus is required for the expression of a MSHA pilus on the P. tunicata cell surface. Our findings demonstrate that production of the MSHA pilus mediates the attachment of P. tunicata to surfaces and that this pilus is a key determinant of attachment of P. tunicata to both abiotic and living surfaces. We also provide evidence that expression of MSHA pilus is enhanced in the presence of cellulose or cellobiose and propose that substrate-sensing mechanisms and pilus expression in P. tunicata have a profound effect on the ecological distribution of this bacterium in marine surface ecosystems.
| ACKNOWLEDGEMENTS |
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Received 25 May 2006;
revised 10 July 2006;
accepted 12 July 2006.
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