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1 Department of Pathobiology, Ontario Veterinary College, University of Guelph, Guelph, Ontario, Canada N1G 2W1
2 Departments of Laboratory Medicine and Pathobiology and Biochemistry, University of Toronto, 6213 Medical Sciences Building, 1 King's College Circle, Toronto, Ontario, Canada M5S 1A8
Correspondence
Carlton L. Gyles
cgyles{at}uoguelph.ca
| ABSTRACT |
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| INTRODUCTION |
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Resistance to PMB induced by the PmrAPmrB regulatory system is well studied in Salmonella enterica serovar Typhimurium (Gunn & Miller, 1996
; Groisman et al., 1997
; Gunn et al., 1998
; Zhou et al., 2001
). This system is a part of the signal transduction network PhoPPhoQ, which controls a plethora of virulence factors including modifications of LPS (Groisman, 2001
). PmrA-induced PMB resistance takes place in response to environmental signals (Mg2+ and pH), and involves modification of lipid A with 4-amino-4-deoxy-L-arabinose (L-Ara4N) and/or phosphoethanolamine (PEtN) in order to reduce the negative charge (Tamayo et al., 2002
; Gibbons et al., 2005
). The genes required for modification of lipid A with L-Ara4N are upregulated by the PmrAPmrB system and include the pmrCAB operon (at centisome 93·5), the pmrF operon (pmrHFIJKLM at centisome 51), and pmrE (also known as ugd at centisome 44) (Gunn et al., 1998
). PmrC is responsible for the addition of PEtN to lipid A at the 1-phosphate residue, which may contribute to survival of S. Typhimurium after treatment with PMB (Lee et al., 2004
). The pmrC gene is homologous to lptA (LPS phosphoethenolamine transferase for lipid A) of Neisseria meningitidis (Cox et al., 2003
).
There are several hypothetical proteins homologous to PmrC in E. coli and S. Typhimurium (Trent & Raetz, 2002
; Reynolds et al., 2005
). E. coli O157 : H7 possesses a 92 kb plasmid pO157 that carries the shf locus (also known as ecf) consisting of shf-wabB-ecf3-msbB2 (Boerlin et al., 1998
; Kim et al., 2004
; Yoon et al., 2004
; Kaniuk et al., 2004
). The ecf3 gene of this shf locus encodes a hypothetical protein highly homologous (83 % identity) to YijP, which is one of the potential PmrC homologues. A recent report showed that a PmrA-regulated cptA gene (yijP orthologue in S. Typhimurium) is required for PEtN substitution in the LPS core (Tamayo et al., 2005
). Therefore, Ecf3 is also predicted to be involved in the modification of PEtN in the first heptose residue of the LPS inner core. It would be interesting to determine if these homologous proteins are also functionally related to PmrC.
In this study, we analysed lipid A modifications that followed mutations in pmrC and/or ecf3 genes in E. coli O157 : H7, and expression of pmrCO157 and its potential homologues in E. coli K-12 strain MC1061. We also determined that, in E. coli O157 : H7 strains, there was a large amount of lipid A species containing the PEtN moiety (1-O-P-PEtN) (Fig. 1
) and the presence of 1-O-P-PEtN lipid A conferred slight resistance to the cationic antimicrobial peptide PMBN. We employed E. coli's rapid PagP-mediated palmitoylation response to EDTA treatment (Jia et al., 2004
) to assess whether the increase in PetN substitution in lipid A might be associated with the OM's resistance to chelation of Mg2+ ions that bridge neighbouring lipid A molecules.
| METHODS |
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pmrC allele. Then, the insert was cloned into the pRE112 vector (Edwards et al., 1998
pmrC. Plasmid pR2-
pmrC was digested with SalI, which cuts at a single site located near the middle of the insert. A non-polar gentamicin (Gm) cassette (aacC1 gene) was purified from pUCGM (Schweizer, 1993
pmrC to create the
pmrC : : aacC1 allele in the suicide vector. The resulting vector, designated pR2-
pmrC : : Gm, was transformed into SM10 donor cells (Edwards et al., 1998
pmrC : : Gm) in order to create
pmrC : : aacC1 mutants (4304-PC and S-28PC) (Table 1
For the ecf3 gene expression plasmid construction, the intact ecf3 gene was amplified from pO157 DNA by PCR with Ecf3-Kpn (5'-ggacggtacctgcatttaaataccggacag-3'; KpnI) and Ecf-H3 (5'-cagaacggaaccgaagcttagaaaatacta-3'; HindIII) primers. The amplicon was cloned into the pUC18 vector digested with KpnI and HindIII, resulting in pEcf3 with an in-frame insertion under the Plac promoter (Table 1
). For ecf3 : : aphA-3 mutation, plasmid pEcf3 was digested with SalI for the insertion of a non-polar kanamycin (Km) cassette (aphA-3 gene) near the middle of the cloned ecf3 gene. The aphA-3 DNA fragment was purified after SalI digestion of pYA3265 (Menard et al., 1993
) and was inserted into the SalI site of pEcf3, resulting in pEcf3 : : Km. Then, PCR with Ecf3-Kpn and Ecf-H3 primers amplified the ecf3 : : aphA-3 allele for subcloning into the SmaI site of suicide vector pRE107 (Edwards et al., 1998
). The resulting vector, designated pR7E3 : : Km, was transferred by transformation into SM10 donor cells. SM10(pR7E3 : : Km) was mated with 4304-PC, to create a double (ecf3 : : aphA-3 and
pmrC : : aacC1) mutant (4304-PCE3) of E. coli O157 : H7. All mutants generated were verified by PCR.
P1 transduction for transfer of the msbB : : Tn5 allele to MC1061.
P1 transduction was used for introduction of an msbB mutation in E. coli MC1061. A temperature-sensitive P1 cmr-100 lysate of BMS67C12 (Somerville et al., 1999
) was prepared as described elsewhere (Miller, 1992
). E. coli MC1061 was then mixed with the P1 cmr-100 lysate prepared from BMS67C12 in order to transfer the msbB : : Tn5 allele to MC1061. The resulting msbB : : Tn5 mutant of MC1061 was verified by PCR and designated MC-msbB (Table 1
).
Analysis of lipid A by TLC.
Analysis of lipid A-compositional profiles was done by TLC separation of 32P-labelled lipid A species released from a mild acid hydrolysis procedure, applied to bacteria cultured with or without EDTA treatment (Zhou et al., 1999
; Jia et al., 2004
). Briefly, the 32P-labelled bacteria were subjected to Bligh/Dyer extraction for the removal of membrane phospholipids (Bligh & Dyer, 1959
). Then, the crude LPS precipitate was subjected to mild acid hydrolysis to cleave the ketosidic linkage between KdoI and the distal glucosamine sugar of lipid A. The lipid A fraction was then obtained from the lower phase of the Bligh/Dyer mixture consisting of chloroform/methanol/water (2 : 2 : 1·8 by vol.). The purified lipid A sample was dried under a stream of nitrogen gas and redissolved in solvent, consisting of chloroform/methanol (4 : 1, v/v). Approximately 1000 c.p.m. of the 32P-labelled sample was applied to the origin of a Silica Gel 60 TLC plate. The TLC plate was developed in a solvent system of chloroform/pyridine/88 % formic acid/water (50 : 50 : 16 : 5 by vol.). The plate was dried and visualized with a PhosphorImager (Amersham Biosciences).
Purification of lipid A species for mass spectrometry.
The lipid A species of wild-type E. coli O157 : H7 strain 4304 were prepared from overnight culture with LuriaBertani (LB) broth (200 ml) at 37 °C. Cells were harvested, washed with PBS and extracted with a single-phase Bligh/Dyer mixture (Bligh & Dyer, 1959
); the lipid A species were released from the cell residue by hydrolysis at pH 4·5 (100 °C for 30 min) in the presence of SDS. The released lipid A species were subjected to two-phase partitioning and the lower phase was dried under a stream of N2. The lipid A species were separated by anion-exchange chromatography on DEAE-cellulose (Zhou et al., 1999
). A 2 ml DEAE cellulose column (Whatman DE52) in the acetate form was prepared and equilibrated with the solvent of chloroform/methanol/water (2 : 3 : 1 by vol.). The total dried lipid A sample redissolved in 2 ml chloroform/methanol/water (2 : 3 : 1 by vol.) was loaded onto the column at its natural flow rate. The column was washed with 12 ml chloroform/methanol/water (2 : 3 : 1 by vol.) and 2 ml fractions were collected by sequential elution with 12 ml chloroform/methanol/60 mM aqueous ammonium acetate (2 : 3 : 1 by vol.), 12 ml chloroform/methanol/120 mM ammonium acetate (2 : 3 : 1 by vol.), 12 ml chloroform/methanol/240 mM ammonium acetate (2 : 3 : 1 by vol.) and 12 ml chloroform/methanol/480 mM ammonium acetate (2 : 3 : 1 by vol.). To locate the fractions containing the desired lipids, 20 µl of each fraction was spotted onto a 10x20 cm Silica Gel 60 TLC plate. The plate was developed in a solvent of chloroform/pyridine/88 % formic acid/water (50 : 50 : 16 : 5 by vol.). The spots were visualized by charring on a hot plate after spraying the chromatogram with a mixture of ethanol/p-anisaldehyde/H2SO4/acetic acid (89 : 2·5 : 4 : 1 by vol.). The DEAE cellulose fractions containing the lipids of interest were then converted to neutral two-phase Bligh/Dyer mixtures by addition of the necessary amounts of chloroform and water. The lower phases were pooled and dried under N2 and stored at 20 °C. For mass spectrometry, the purified lipid A sample was dissolved in chloroform/methanol (4 : 1, v/v) before being mixed (1 : 1, v/v) on a slide with a matrix of a saturated solution of 2,5-dihydroxybenzoic acid in 50 % acetonitrile. The sample mixtures were allowed to dry at room temperature prior to mass analysis. The spectrum was acquired in the negative linear mode by using matrix-assisted laser desorption-ionization/time of flight (MALDI-TOF) mass spectrometry.
Determination of MICs and the OM-permeabilizing activity of PMBN.
The microdilution method was used as recommended by the National Committee for Clinical Laboratory Standards (NCCLS, 2002
). In brief, 100 µl of twofold serial dilutions of the antibiotics in double strength MuellerHinton broth (pH 7·2) were dispensed in 96-well microtitre plates. Bacteria (100 µl) at a final concentration of 5x105 c.f.u. ml1 in PBS were added to each well. The MICs were recorded as the lowest concentration of antibiotic that did not allow visible bacterial growth after 20 h incubation at 37 °C. The OM-permeabilizing activity of PMBN was assessed by using a sublethal concentration of PMBN (10 µg ml1) together with twofold serial dilutions of the hydrophobic antibiotic erythromycin (Vaara & Porro, 1996
; Tsubery et al., 2001
).
| RESULTS AND DISCUSSION |
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pmrC : : aacC1 and ecf3 : : aphA-3) in 4304-PCE3 did not prevent the PEtN modification of lipid A (1-O-P-PEtN) (lane 3, Fig. 3b
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pmrC : : aacC1 mutation in a pO157-cured strain of E. coli O157 : H7 Sakai (Sakai-28) and showed that a weak 1-O-P-PEtN spot was also present among the lipid A species released from the
pmrC : : aacC1 mutant (S-28PC) of Sakai-28 (lanes 2 and 3, Fig. 3c
A high-copy-number pmrCO157 clone generates 1-O-P-PEtN lipid A in MC1061
The difference in occurrence of the 1-O-P-PEtN lipid A in E. coli O157 : H7 and K-12 might be related to conditions that increase expression of the pmrC gene. To test this possibility, MC1061 transformants carrying pmrCO157 in a low- (pMrC177) or a high- (pMrC18) copy plasmid (Table 1
) were investigated by TLC experiments for possible lipid A modifications. As shown in Fig. 4
(a), MC1061 carrying pMrC18 (lane 3) produced a large amount of PEtN-modified lipid A species (1-O-P-PEtN), whereas the pMrC177 transformant (lane 4, Fig. 4a
) did not produce detectable quantities. The natural occurrence of 1-O-P-PEtN species in EHEC might therefore be associated with increased PmrC activity, since overproduction of PmrC in MC1061 generated similar amounts of 1-O-P-PEtN species without induction of further PmrA-mediated lipid A modification with L-Ara4N. Only a PMB-resistant mutant (Nummila et al., 1995
) and NH4VO3-treated E. coli cells have previously been shown to be capable of modifying lipid A with PEtN, unlike the case with S. Typhimurium (Zhou et al., 1999
). It is also known that the pmrCAB operon is activated in cultures grown under limited Mg2+ and a mild acid pH around 5·86·0 (Raetz, 2001
; Gibbons et al., 2005
). In this study, we discovered that pmrCO157 gene dosage affects the occurrence of 1-O-P-PEtN in E. coli K-12 strain MC1061 independent of the known PmrA-inducing signals. The natural occurrence of 1-O-P-PEtN in EHEC may also be independent of the activated PmrA-mediated lipid A modifications. The pMrC18 complementation of 4304-PC (lane 7, Fig. 4a
) and no other distinctive occurrence of modified lipid A spots (except a small spot below the 1-O-P-PEtN, which appears to be 1-O-P-PEtN/4'-O-P-PEtN) in the TLC plate support this possibility.
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Possible PEtN substitutions in the lipid A-core region of O157 LPS are depicted in Fig. 6
. PmrC is proven to be responsible for the addition of PEtN to the lipid A at the 1-phosphate residue (Lee et al., 2004
; Reynolds et al., 2005
). Our results have shown that none of the predicted PmrC homologues (Ybip/YhbX/YijP/Ecf3) was involved in the formation of the remaining 1-O-P-PEtN lipid A species. However, YhjW (EptB) was recently reported to be responsible for the addition of PEtN to the second Kdo residue (Reynolds et al., 2005
), and YijP (CptA) in S. Typhimurium was involved in the addition of PEtN to the phosphorylated heptose-I residue (Tamayo et al., 2005
). E. coli O157 : H7 possesses a plasmid-borne shf locus consisting of shf-wabB-ecf3-msbB2 (Kim et al., 2004
; Kaniuk et al., 2004
). The Ecf3 of pO157 is highly homologous (83 % identity) to YijP, suggesting the same function as that of CptA of S. Typhimurium. In addition, WabB shows a UDP-N-acetylglucosamine : (heptose) LPS
-1,7-N-acetylglucosamine transferase that is responsible for a non-stoichiometric N-acetylglucosamine substitution in the heptose-III residue (Kaniuk et al., 2004
). Therefore, the shf locus seems to be a module involved in O157 LPS lipid A-core modifications, and is also suggested to play a role in the survival and persistence of E. coli O157 : H7 in cattle and in the environment (Yoon et al., 2005
).
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| ACKNOWLEDGEMENTS |
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Received 17 November 2005;
accepted 18 November 2005.
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