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Microbiology 153 (2007), 2781-2790; DOI  10.1099/mic.0.2007/007294-0
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Microbiology 153 (2007), 2781-2790; DOI  10.1099/mic.0.2007/007294-0
© 2007 Society for General Microbiology

Functional characterization of three genes encoding putative oxidoreductases required for cercosporin toxin biosynthesis in the fungus Cercospora nicotianae

Hui-Qin Chen1, Miin-Huey Lee2 and Kuang-Ren Chung1,3

1 Citrus Research and Education Center, Institute of Food and Agricultural Sciences (IFAS), University of Florida, 700 Experiment Station Road, Lake Alfred, FL 33850, USA
2 Department of Plant Pathology, National Chung-Hsing University, Taichung 402, Taiwan
3 Department of Plant Pathology, Institute of Food and Agricultural Sciences (IFAS), University of Florida, 700 Experiment Station Road, Lake Alfred, FL 33850, USA

Correspondence
Kuang-Ren Chung
krchung{at}ufl.edu


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Cercosporin is a non-host-selective, photoactivated polyketide toxin produced by many phytopathogenic Cercospora species, which plays a crucial role during pathogenesis on host plants. Upon illumination, cercosporin converts oxygen molecules to toxic superoxide and singlet oxygen that damage various cellular components and induce lipid peroxidation and electrolyte leakage. Three genes (CTB5, CTB6 and CTB7) encoding putative FAD/FMN- or NADPH-dependent oxidoreductases in the cercosporin toxin biosynthetic pathway of C. nicotianae were functionally analysed. Replacement of each gene via double recombination was utilized to create null mutant strains that were completely impaired in cercosporin production as a consequence of specific interruption at the CTB5, CTB6 or CTB7 locus. Expression of CTB1, CTB5, CTB6, CTB7 and CTB8 was drastically reduced or nearly abolished when CTB5, CTB6 or CTB7 was disrupted. Production of cercosporin was revived when a functional gene cassette was introduced into the respective mutants. All ctb5, ctb6 and ctb7 null mutants retained wild-type levels of resistance against toxicity of cercosporin or singlet-oxygen-generating compounds, indicating that none of the genes plays a role in self-protection.


Abbreviations: CTB, cercosporin toxin biosynthesis; CSPD, disodium 3-[4-methoxyspiro{1,2-dioxetane-3,2'-(5'-chloro)tricyclo[3.3.1.1]decan}-4-yl]phenyl phosphate; dUTP, 2'-deoxyuracil 5'-triphosphate; FGSC, Fungal Genetics Stock Center; PDA, potato dextrose agar

The GenBank/EMBL/DDBJ accession numbers. for the CTB5, CTB6 and CTB7 sequences of Cercospora nicotianae are DQ991507, DQ991508 and DQ991509 respectively.


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Many phytopathogenic fungi are equipped with various arsenals such as secretion of cell-wall-degradation enzymes and formation of phytotoxins in order to invade their hosts (Schafer, 1994Down). Host-selective toxins kill plant cells by targeting a specific cellular enzyme or component, and thus are toxic only to a limited range of host cultivars (Walton, 1996Down). In contrast, non-host-selective toxins, targeting various cellular components, enable the producing pathogens to have wide host ranges. Cercosporin (Fig. 1aDown) is a non-host-selective perylenequinone toxin produced by many phytopathogenic Cercospora species, which have been reported to affect several hundred plant species, including many major crops such as corn, rice, banana, coffee, sugar beet, soybean, peanut and tobacco (reviewed by Daub & Ehrenshaft, 2000Down; Daub et al., 2005Down). Cercosporin is an important virulence determinant in Cercospora species (Callahan et al., 1999Down; Choquer et al., 2005Down, 2007Down; Dekkers et al., 2007Down; Shim & Dunkle, 2003Down; Upchurch et al., 1991Down). Compared to other non-host-selective phytotoxins, cercosporin has several unique features, including light activation for its biosynthesis (Ehrenshaft & Upchurch, 1991Down), light- and oxygen-dependent cytotoxicity (Yamazaki et al., 1975Down), and the production of reactive oxygen species such as singlet oxygen and superoxide (Daub & Hangarter, 1983Down). In the past two decades, intensive research has been focused on elucidation of the genetic mechanisms involved in self-protection from cercosporin and singlet-oxygen-generating compounds (Chung et al., 1999Down, 2003aDown; Daub et al., 1992Down, 2000Down; Ehrenshaft et al., 1998Down, 1999Down; Jenns & Daub, 1995Down; Sollod et al., 1992Down).


Figure 1
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Fig. 1. Cercosporin toxin produced by Cercospora spp. and the biosynthetic CTB gene cluster: (a) Chemical structure of cercosporin [1,12-bis-(2-hydroxypropyl)-2,11-dimethoxy-6,7-methylenedioxy-4,9-dihydroxyperylene-3,10-quinone], containing two identical polyketomethylene units (separated by the dashed line). (b) Schematic illustration of the cercosporin toxin biosynthetic gene cluster (CTB1–8) with predicted functions in C. nicotianae. Arrows indicate the orientation of transcription. Sizes of the coding sequences are also indicated.

 
Cercosporin was first isolated from the soybean pathogen Cercospora kikuchii in 1957 (Kuyama & Tamura, 1957Down) and its structure was chemically determined by Yamazaki & Ogawa (1972)Down. In addition to plants, cercosporin has been shown to be toxic to various cell types, including bacteria and many fungi and animal cells, due to the production of reactive oxygen species (Daub et al., 2005Down). Cercosporin is capable of breaking down different cellular components such as lipids, proteins and nucleic acids, depending on its localization in cells. During pathogenesis in host plants, cercosporin has been shown to damage cell membranes by causing lipid peroxidation, electrolyte leakage and eventually cell death (Daub, 1982Down; Daub & Briggs, 1983Down).

Based on substrate feeding experiments (Okubo et al., 1975Down) cercosporin has been proposed to be synthesized by a fungal polyketide pathway. However, the genes or enzymes involved in cercosporin production remain largely unknown. Recent studies with molecular and genetic tools began to uncover the cercosporin biosynthetic pathway and regulation network (Daub et al., 2005Down). Light has long been known to be required for cercosporin toxicity. Biosynthesis of cercosporin is also primarily triggered by light (Jenns et al., 1989Down). In order to elucidate cercosporin biosynthesis and regulation at molecular levels, several cercosporin-deficient mutants were identified via a restriction-enzyme-mediated mutagenesis approach (Chung et al., 2003bDown). As a result, two linked genes, CTB1 (encoding a polyketide synthase) and CTB3 (encoding a dual methyltransferase/monooxygenase) that were required for cercosporin biosynthesis were identified and characterized from Cercospora nicotianae (Choquer et al., 2005Down; Dekkers et al., 2007Down). We later obtained nine additional ORFs beyond the boundaries of CTB1 and CTB3 by combining chromosome walking and sequence analysis. Six of them (CTB2, CTB4, CTB5, CTB6, CTB7 and CTB8) encode polypeptides proposed to be involved in cercosporin production (Chen et al., 2007Down). Expression of eight of the genes was induced under cercosporin-producing conditions and was co-ordinately regulated by the Zn(II)Cys6 transcriptional activator, CTB8 (Chen et al., 2007Down). We hypothesize that cercosporin, like many fungal secondary metabolites (Keller et al., 2005Down), is synthesized by a cluster of co-regulated genes, in this case designated the cercosporin toxin biosynthesis (CTB) gene cluster. The functions of CTB1, CTB2, CTB3, CTB4 and CTB8 in cercosporin biosynthesis have been unambiguously demonstrated by analysing the respective null mutants (Chen et al., 2007Down; Choquer et al., 2005Down, 2007Down; Dekkers et al., 2007Down). The functions of CTB5, CTB6 and CTB7, which encode proteins similar to numerous FAD/FMN- or NADPH-dependent oxidoreductases or dehydrogenases, remain to be elucidated. In the present study, we characterized these genes by creating loss- and gain-of-function strains; we present conclusive evidence to demonstrate their roles in cercosporin biosynthesis, and completely define the core CTB gene cluster.


    METHODS
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Fungal isolates and culture conditions.
Wild-type C. nicotianae (ATCC 18366) and genetically modified strains were maintained on complete medium (CM) (Jenns et al., 1989Down). Cercosporin-production mutants were screened daily for the lack of red pigment production on thin potato dextrose (glucose) agar (PDA, Difco, Becton, Dickinson and Company) plates by a method described previously (Chung et al., 2003bDown). We found that a thin PDA plate (less than 15 ml medium in a 100x15 mm Petri dish) supported the highest production of cercosporin under illumination. Assays for sensitivity to photosensitizing compounds (cercosporin, eosin Y, haematoporphyrin, methylene blue or toluidine blue) were performed by growing fungal isolates on CM containing 10 or 100 µM test compound under continuous light as described previously (Jenns & Daub, 1995Down). All chemicals were purchased from Sigma-Aldrich unless otherwise stated, and dissolved appropriately in acetone or water to make a 10 or 100 mM stock solution.

Cercosporin analysis.
Cercosporin was extracted with 5 M KOH or with ethyl acetate from agar plugs with mycelia as described previously (Choquer et al., 2005Down; Chung, 2003Down). Cercosporin in KOH extracts was quantified by measuring A480 using a Genesys 5 spectrophotometer (Spectronic Instruments). Ethyl acetate extracts were analysed on a TLC plate coated with a 60 F254 fluorescent silica gel with ethyl acetate/hexane/methanol/H2O (6 : 4 : 1.5 : 1, by vol.) as a solvent (Choquer et al., 2005Down).

CTB5, CTB6 and CTB7 gene disruption.
A strategy employing the split-hygromycin phosphotransferase B gene (HYG) marker fused with truncated CTB5, CTB6 or CTB7 fragments was used for targeted gene disruption in C. nicotianae as described previously (Choquer et al., 2005Down). All DNA clones were built on the backbone of pGEM-T easy vector (Promega). For CTB5 disruption, a 3.3 kb fragment was amplified with primers CTB5R (5'-GCTACAGTGCGACGGAGTCCTG-3') and CTB7I (5'-CTCGGCCGCGAGAAGGCTT-3') from genomic DNA and cloned to yield pCTB5. A 1.0 kb HindIII–AgeI fragment in pCTB5 was replaced with a 1.6 kb BamHI, end-filled fragment harbouring the HYG cassette from pUCATPH [obtained from the Fungal Genetics Stock Center (FGSC), University of Missouri, Kansas City, MO, USA] to generate the disruption construct, pctb5. Two truncated HYG and CTB5 fusion fragments overlapping within the HYG region (800 bp) were amplified by PCR from pctb5, and directly transformed into wild-type C. nicotianae for gene disruption. A 2.3 kb fragment containing 5' CTB5 fused with 3' HYG was amplified with primers CTB7I and Hygsplit2 (5'-CCGACAGTCCCGGCTCCGGATCGG-3'); a 2.1 kb fragment containing 5' HYG fused with 3' CTB5 was amplified with primers CTB5R and Hygsplit1 (5'-AGGAGGGCGTGGATATGTCCTGCGGG-3').

For CTB6 disruption, a 2 kb fragment was amplified with primers ctb6F (5'-CAAACGCAGATACCTCGCCGCATG-3') and mfs4 (5'-GCAAATTCTGAGGATTTCCCTTG-3'), and cloned to form pCTB6. A 0.5 kb BglII–HindIII fragment in pCTB6 was replaced with the HYG cassette to generate p{Delta}ctb6. Two fragments, of 1.7 and 1.9 kb, overlapping within HYG, were obtained from p{Delta}ctb6 with primers ctb6F and hygsplit1 and mfs4 and hygsplit2, respectively.

For CTB7 disruption, a 5 kb fragment was amplified with primers tf4 (5'-CCATGAAGCGAGATGC-3') and ord3 (5'-CGTATACCGCTACCCATGTCGTAC-3'), and cloned to become pCTB7. A 0.9 kb Eco47III fragment was replaced with the HYG cassette to yield the disruption construct, p{Delta}ctb7. Split-HYG marker fragments, of 2.5 and 1.5 kb, were amplified from p{Delta}ctb7 with primers tf4 and hygsplit1 and ord3 and hygsplit2, respectively.

Complementation and fungal transformation.
The full-length CTB5, CTB6 or CTB7 ORF, including the corresponding endogenous promoter, was independently amplified with gene-specific primers by a high-fidelity DNA polymerase (Roche Applied Science). Genetic complementation was performed by co-transformation of a PCR fragment with the pCB1532 plasmid carrying the Magnaporthe grisea acetolactate synthase gene (SUR) cassette for sulfonylurea resistance (Sweigard et al., 1997Down, obtained from FGSC) into {Delta}ctb5-D8, {Delta}ctb6-D18 or {Delta}ctb7-D2 null mutants. Transformants were selected against sulfonylurea and screened for cercosporin production. Fungal protoplasts were prepared and transformed using CaCl2 and PEG by methods described previously (Chung et al., 2002Down). Transformants were selected on medium containing 250 µg hygromycin ml–1 (Roche), or 5 µg chlorimuron ethyl ml–1 (Chem Service) as appropriate and tested for cercosporin production on PDA plates (Chung, 2003Down).

Sequence analysis.
Fungal DNA was isolated with a DNeasy Plant Mini kit (Qiagen). Full-length CTB5, CTB6 or CTB7 was amplified with the respective primers as described above and cloned into pGEM-T easy vector (Promega) for sequence analysis from both directions at Eton Bioscience. PCR primers were synthesized by Integrated DNA Technologies. Searches for sequence similarity and functional domains were performed with web-based software programs as described previously (Chen et al., 2007Down). Sequence data from this study have been deposited with the EMBL/GenBank Data Libraries under accession nos. DQ991507 (CTB5), DQ991508 (CTB6) and DQ991509 (CTB7).

Molecular techniques.
Standard procedures were used for endonuclease digestion of DNA, electrophoresis, and Southern and Northern blot hybridization. The hybridization probes were generated by PCR with gene-specific primers to incorporate DIG-11-dUTPs (Roche) into CTB1, CTB5, CTB6, CTB7 or CTB8 DNA fragments as previously described (Choquer et al., 2005Down; Chen et al., 2007Down). The conditions and procedures for probe labelling, hybridization, post-hybridization washing and immunological detection of the probe with a disodium 3-[4-methoxyspiro{1,2-dioxetane-3,2'-(5'-chloro)tricyclo[3.3.1.1]decan}-4-yl]phenyl phosphate (CSPD) chemiluminescent substrate for alkaline phosphatase were carried out according to the manufacturer's instructions (Roche).

Pathogenicity assay.
Assay for fungal pathogenicity was carried out on detached tobacco leaves (Nicotiana tabacum ‘Burley 21’) with conidia suspensions (5x104 conidia ml–1) as described previously (Choquer et al., 2005Down).


    RESULTS
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Characterization of the CTB5, CTB6 and CTB7 genes
In total, eight CTB genes (CTB1–8) are closely linked in the genome of C. nicotianae and probably involved in biosynthesis of cercosporin (Fig. 1aUp). In this study we utilized a genetic approach to further define the roles of CTB5, CTB6 and CTB7 in cercosporin biosynthesis. Both CTB5 and CTB7 are located near the left border of the cercosporin biosynthetic gene cluster (Fig. 1bUp). The coding regions of CTB5 and CTB7 are separated by 867 bp and are transcribed in the same direction. The CTB5 ORF contains 1380 bp with no introns and is predicted to encode a polypeptide of 459 aa. The translation product of CTB5 displays 30–59 % identity and 50–72 % similarity to numerous uncharacterized, conserved, hypothetical proteins from sequenced genomes of fungi (data not shown). The amino acid sequence deduced from the CTB5 ORF also resembles various oxygen- and FAD/FMN-dependent oxidoreductases of various bacteria in the databases. CTB5 has a putative TonB-dependent receptor protein signature, a potential oxygen-interacting site, a FAD-binding site, a tyrosine sulfation site, and a putative NADH-binding site (Fig. 2Down).


Figure 2
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Fig. 2. Diagrams of the CTB5, CTB6, and CTB7 proteins, showing unique motifs and various consensus sequences.

 
The CTB6 gene is located near the right border of the CTB gene cluster (Fig. 1bUp), consists of 1074 bp with no introns, and presumably encodes a 357 aa polypeptide. The translation product of CTB6 has 26–40 % identity and 48–61 % similarity to numerous NADPH-dependent reductases, oxidoreductases or dehydrogenases of various micro-organisms. An alcohol dehydrogenase family signature and a motif that probably interacts with NADPH were identified in CTB6 (Fig. 2Up).

The CTB7 ORF consists of 1401 bp interrupted by a single intron of 48 bp and is predicted to encode a protein of 450 aa. The translation product of CTB7 has 22–33 % identity and 38–51 % similarity to a wide variety of FAD/FMN-dependent oxidoreductases, hydrolases, or monooxygenases of fungi and bacteria. CTB7 has two FMN/FAD or flavin-containing monooxygenase-binding sites and an amidation site (Fig. 2Up).

Disruption of the CTB5, CTB6 and CTB7 genes
Targeted gene disruption was performed to evaluate the functions of CTB5, CTB6 and CTB7 associated with cercosporin production in C. nicotianae. Transformants were screened for cercosporin production on a thin PDA plate. In total, 53 of 202 (26 %) transformants recovered from CTB5 disruption, 10 of 141 (7.1 %) from CTB6 disruption, and 3 of 16 (19 %) from CTB7 disruption were completely defective in cercosporin accumulation.

Successful disruption of each CTB locus was validated by Southern blot analysis. Hybridization of EcoRI/HindIII-digested genomic DNA from the wild-type and six putative ctb5 disruptants to a CTB5 gene probe identified a 3.0 kb band in wild-type (Fig. 3a, bDown). In contrast, all transformants had a 2.4 kb hybridizing band instead, due to the insertion of HYG within CTB5 and the presence of an additional EcoRI site in the HYG gene cassette. Three hybridizing bands, >4 kb (indicated by arrowheads in Fig. 3bDown), in DNA prepared from the ctb5-D1 and D9 disruptants, were due to the ectopic integrations of split marker fragments in the genome. Northern blot analysis of total RNA from two ctb5 disruptants also confirmed the null mutation at CTB5 (Fig. 3cDown).


Figure 3
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Fig. 3. Targeted gene disruption of CTB5 in C. nicotianae. (a) Schematic depiction of restriction maps of CTB5 in wild-type (WT) and ctb5-disrupted fungal genomes. The split-hygromycin phosphotransferase B gene (HYG) marker fused with the truncated CTB5 fragments was amplified and used for disruption. Oligonucleotide primers (ctb7I, ctb5R, ctb51, hygsplit 1 and hygsplit 2) used for cloning, probe labelling and amplification of the split markers are also indicated. Restriction enzyme site abbreviations: A, AgeI; E, EcoRI; H3, HindIII. Note: drawing is not to scale. (b) Southern blot hybridization of genomic DNA from the wild-type and six ctb5 knockouts confirms gene-specific replacement at the CTB5 locus. Fungal DNA was digested with EcoRI and HindIII, electrophoresed, blotted onto a nylon membrane, and hybridized to a CTB5-specific probe as indicated above. The hybridizing bands indicated by arrows in DNA prepared from two disruptants (ctb5-D1 and D9) may be due to the ectopic integrations in the genome. (c) Northern blot analysis of total RNA isolated from the wild-type and two {Delta}ctb5 mutants (D8 and D10). Ethidium-bromide-stained rRNA is shown to indicate the relative loading of the samples.

 
As shown in Fig. 4(a, b)Down, hybridization of NcoI/XhoI-digested genomic DNA to a CTB6 gene probe yielded a 2.0 kb hybridizing band in wild-type and a 1.8 kb band in three putative {Delta}ctb6 disruptants due to the presence of an extra NcoI site in the inserted HYG fragment. The hybridization patterns confirmed a successful disruption at the CTB6 locus. Hybridizing bands (>2.0 kb and <1.5 kb) due to the ectopic integration of PCR fragments were detected in DNA prepared from the ctb6-D4 disruptant. Northern blot hybridization of total RNA from two ctb6 disruptants further validated the null mutation at CTB6 (Fig. 4cDown).


Figure 4
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Fig. 4. Targeted gene disruption of CTB6 in C. nicotianae. (a) Restriction maps of CTB6 in wild-type (WT) and {Delta}ctb6-disrupted fungal genomes, and the split-hygromycin phosphotransferase B gene (HYG) marker fused with the truncated CTB6 fragments. Oligonucleotide primers used for cloning, probe labelling and amplification of the split markers are also indicated. (b) Southern blot analysis of genomic DNA prepared from the wild-type and three ctb6 knockouts. Fungal DNA was digested with NcoI and XhoI, electrophoresed, blotted onto a nylon membrane, and hybridized to a CTB6-specific probe. The hybridizing bands indicated by arrows in DNA prepared from ctb6-D4 were probably due to the ectopic integration of genomic DNA. (c) Northern blot analysis of total RNA isolated from the wild-type and two {Delta}ctb6 mutants (D8 and D11). Ethidium-bromide-stained rRNA is shown to indicate the relative loading of the samples.

 
The hybridization profiles shown in Fig. 5(a, b)Down also confirmed targeted disruption of CTB7. The CTB7 probe hybridized to 2.7 and 3.4 kb BclI fragments in DNA purified from the wild-type and five putative ctb7 disruptants, respectively. Ectopic insertions were also detected in DNA from the {Delta}ctb7-D1, D4 and D7 disruptants. Hybridization of total RNA from wild-type and two ctb7 disruptants to a CTB7 probe also confirmed the null mutation at CTB7 (Fig. 5cDown).


Figure 5
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Fig. 5. Gene replacement of CTB7 in C. nicotianae. (a) Restriction maps of CTB7 in wild-type (WT) and {Delta}ctb7-disrupted fungal genomes, and the split-hygromycin phosphotransferase B gene (HYG) marker fused with the truncated CTB7 fragments. Oligonucleotide primers used for cloning, probe labelling and amplification of the split markers are also indicated. (b) Southern blot analysis of genomic DNA prepared from the wild-type and five putative ctb7 disruptants. Fungal DNA was digested with BclI, electrophoresed, blotted onto a nylon membrane, and hybridized to a CTB7-specific probe. The hybridizing bands indicated by arrows in DNA prepared from three disruptants (ctb6-D1, D4 and D7) were due to the ectopic integration of genomic DNA. (c) Northern blot analysis of total RNA isolated from the wild-type and two {Delta}ctb7 mutants (D1 and D2). Ethidium-bromide-stained rRNA is shown to indicate the relative loading of the samples.

 
Functional complementation
To further evaluate the roles of CTB5, CTB6 and CTB7 in relation to cercosporin biosynthesis, genetic complementation was carried out by co-transforming a functional CTB5, CTB6 or CTB7 gene cassette (under its own promoter) with plasmid pCB1532 into the respective disruptants (ctb5-D8, ctb6-D18 and ctb7-D2). Transformants were selected on media containing sulfonylurea then tested for cercosporin production on thin PDA plates. The results indicated that transformation of full-length CTB5, CTB6 or CTB7 genes into the ctb5-D8, ctb6-D18 or ctb7-D2 disruptants, respectively, enabled the mutants to restore cercosporin production to levels comparable to the wild-type (see below).

Cercosporin production
The amounts of cercosporin in KOH extracts were determined, revealing that the absorbance values obtained from the ctb5, ctb6 or ctb7 disruptants were indistinguishable from the controls (agar plugs only) and were considered to be zero (Table 1Down). To determine if a trace amount of cercosporin was produced by the disrupted mutants, cercosporin was extracted by ethyl acetate from agar plugs with fungal mycelia and the extracts were analysed by TLC. As shown in Fig. 6Down, the wild-type and the CTB5-, CTB6- and CTB7-complemented strains produced a red pigment (cercosporin), whereas the ctb5, ctb6 or ctb7 disruptants produced no detectable cercosporin. Thus, disruption of the CTB5, CTB6 or CTB7 gene completely blocked cercosporin biosynthesis, but disruptants accumulated a yellowish or purplish pigment that was barely visible on fluorescent-TLC plates (Fig. 6Down).


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Table 1. Accumulation of cercosporin and radial growth of C. nicotianae isolates in the presence of singlet-oxygen-generating photosensitizers

 

Figure 6
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Fig. 6. TLC analysis of cercosporin produced by wild-type (WT), ctb5, ctb6, and ctb7 disruptants and complemented strains of C. nicotianae. Fungal isolates were grown on PDA under continuous light for 5 days and cercosporin was extracted with ethyl acetate.

 
Transcriptional inhibition of the CTB genes in the ctb5-, ctb6- and ctb7-disrupted mutants
Northern blot analysis was performed to determine if disruption of the CTB5, CTB6 or CTB7 gene would affect expression of the other CTB genes in the cluster (Fig. 7Down). The results indicated that expression of CTB5 was almost undetectable in the ctb6 and ctb7 null mutants (Fig. 7aDown). Accumulation of the CTB6 transcript was slightly reduced in two ctb5 null mutants, but completely abolished in two ctb7 null mutants (Fig. 7bDown). Expression of CTB7 was barely detectable in the ctb5 and ctb6 null mutants (Fig. 7cDown). Similarly, expression of CTB1 and CTB8 was drastically down-regulated in the ctb5 and ctb6 null mutants, and accumulation of the CTB1 but not the CTB8 gene transcript was also reduced in two ctb7 null mutants (Fig. 8Down).


Figure 7
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Fig. 7. Northern blot analysis of total RNA prepared from the wild-type (WT), and the ctb5 (D8 and D10), ctb6 (D8 and D11) and ctb7 (D1 and D2) disruptants of C. nicotianae. (a) Accumulation of CTB5 in ctb6 and ctb7 disruptants. (b) Expression of CTB6 in ctb5 and ctb7 disruptants. (c) Expression of CTB7 in ctb5 and ctb6 disruptants. Total RNA was electrophoresed in formaldehyde-containing gels, blotted onto nylon membranes and hybridized to probes at 65 °C as indicated. Ethidium-bromide-stained rRNA is shown to indicate the relative loading of the samples.

 

Figure 8
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Fig. 8. Northern blot analysis of total RNA prepared from the wild-type (WT), and the ctb5 (D8 and D10), ctb6 (D8 and D11) and ctb7 (D1 and D2) disruptants of C. nicotianae, indicative of a ‘feedback’ transcriptional inhibition of the CTB1 and CTB8 genes. Total RNA was electrophoresed in formaldehyde-containing gels, blotted onto nylon membranes and hybridized to a CTB1 or CTB8 probe as indicated. Ethidium-bromide-stained rRNA is shown to indicate the relative loading of the samples.

 
Sensitivity to cercosporin and other singlet-oxygen-generating photosensitizers
To determine if CTB5, CTB6 or CTB7 play a role in cellular resistance to cercosporin and other singlet-oxygen-generating photosensitizers, wild-type and ctb5, ctb6 and ctb7 disruptants were grown on media containing exogenous photosensitizing compounds (cercosporin, eosin Y, haematoporphyrin, methylene blue or toluidine blue). As compared to the wild-type, ctb5, ctb6 or ctb7 null mutants did not show significant growth retardation in the presence of exogenous cercosporin or other photosensitizers (Table 1Up). For comparison purpose, strain 205C3, which is deficient in a zinc finger transcriptional factor, CRG1, required for normal cercosporin production and resistance (Chung et al., 2003aDown), was tested. In agreement with the previous findings (Chung et al., 2003aDown), the 205C3 mutant exhibited partial sensitivity to cercosporin but not to other photosensitizers, and produced less than 50 % of the cercosporin produced by the wild-type (Table 1Up).

Pathogenicity
As assayed on detached tobacco leaves, the ctb5, ctb6 or ctb7 disruptants caused fewer lesions compared to the wild-type. However, the complementation strains incited necrotic lesions on tobacco, indistinguishable from those induced by the wild-type (data not shown).


    DISCUSSION
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Cercosporin is a polyketide compound. Biosynthesis of cercosporin has been predicted to start with decarboxylation of acetyl-CoA and malonyl-CoA units to synthesize petaketide, followed by ring closure, oxidation, hydration and methylation to form the polyketomethylene backbone of cercosporin (Okubo et al., 1975Down). Chromosome walking coupled with sequence analysis led to identification of the cercosporin toxin biosynthesis (CTB) cluster. The core CTB gene cluster in C. nicotianae consists of a transcriptional regulator gene, a potential transporter gene, and six biosynthetic genes (Chen et al., 2007Down). To fully determine the function of the CTB1–8 genes associated with cercosporin production, we performed genetic and molecular analysis of C. nicotianae strains with loss- and gain-of-function mutations in each CTB gene (Chen et al., 2007Down; Choquer et al., 2005Down, 2007Down; Dekkers et al., 2007Down). In this present study we analysed three putative oxidoreductase-encoding genes (CTB5, CTB6 and CTB7) that were localized in the CTB cluster, and obtained experimental evidence to support their crucial roles in cercosporin biosynthesis.

Although the biochemical function of CTB5, CTB6 and CTB7 as oxidoreductases remains to be proven, molecular and genetic analyses clearly indicated that they were required for cercosporin biosynthesis. A prior study revealed that accumulation of CTB5, CTB6 and CTB7 transcripts was co-ordinately controlled by the CTB8 transcriptional activator (Chen et al., 2007Down). In the present study, disruption of CTB5, CTB6 or CTB7 yielded mutants that were completely impaired in cercosporin production, yet retained the wild-type level of resistance to cercosporin and other singlet-oxygen-generating photosensitizers. We have also demonstrated that disruption of each of the CTB5, CTB6 or CTB7 genes markedly reduces transcriptional accumulation of the other CTB gene transcripts, consistent with the previous finding of the presence of a feedback inhibition mechanism (Chen et al., 2007Down). However, it appears that such inhibition was not completely stringent since expression of CTB6 was slightly reduced in two ctb5 null mutants, but completely undetectable in the ctb7 null mutants (Fig. 7Up). Furthermore, expression of CTB8 was apparently down-regulated in the ctb5 or ctb6 null mutants, but was normal in the ctb7 mutants (Fig. 8Up).

CTB5 has amino acid similarity to many oxygen- and FAD/FMN-dependent oxidoreductases of bacteria and fungi, including vanillyl-alcohol oxidases, D-lactate dehydrogenases, 6-hydroxy-D-nicotine oxidases (accession nos. P56216, P06149, ZP_00522304, and CAA29416), and mitomycin radical oxidases of Streptomyces (accession no. P43485). These enzymes catalyse the oxidation of a wide variety of substrates for energy production and conversion (Rule et al., 1985Down; van den Heuvel et al., 2000Down). The mitomycin radical oxidase, however, oxidizes the reduced form of mitomycins and is involved in cellular self-defence against mitomycin in Streptomyces lavendulae (August et al., 1994Down). The enzyme encoded by CTB5 is proposed to utilize FAD and/or FMN as a cofactor and catalyse the oxidation steps in the cercosporin biosynthetic pathway. CTB5 has a putative TonB-dependent receptor signature. The TonB protein is involved in the passive uptake of large and low-affinity substrates by interacting with outer-membrane receptors in Escherichia coli (Bell et al., 1990Down). Without TonB, the receptors bind their substrates but fail to transport them into the periplasmic space. In addition, CTB5 also has a tyrosine sulfation site that is physiologically associated only with proteins or domains that are transported or reside in the Golgi lumen (Huttner, 1988Down). It will be interesting to determine how those domains contribute to CTB5 function.

The protein encoded by CTB6 displays considerable similarity to numerous NADPH-dependent reductases, oxidoreductases or dehydrogenases in bacteria, yeasts and plants. Some members include aldehyde reductases, nucleoside-diphosphate sugar epimerases, carbonyl reductases, dihydroflavonol 4-reductases and cinnamyl-alcohol dehydrogenases (accession nos. 1Y1PA, XP_71038, ZP_00592614, and ZP_00528210). A computer search identified an alcohol dehydrogenase (adh) family signature and a NADPH-binding motif in CTB6. A CTB6 homologue in Saccharomyces cerevisiae (accession no. NP_011476) was thought to catalyse NADPH-dependent reduction of the bicyclic diketone bicyclo[2,2,2]octane-2,6-dione to the chiral ketoalcohol-6-hydroxybicyclo[2,2,2]octane-2-one (Goffeau et al., 1996Down). It is tempting to speculate that the CTB6 enzyme catalyses an NADPH-dependent reduction or hydration step during ring closure of pentaketide in the cercosporin biosynthetic pathway.

The translation product of CTB7 has an amidation site and two FMN/FAD or flavin-containing monooxygenase-binding sites. Proteins having similarity to the CTB7 include flavoprotein monooxygenases and pyridine nucleotide-disulfide oxidoreductases of Pseudomonas (accession nos. YP_2333205 and YP_272409), and FAD-dependent oxidoreductases of Xanthomonas (accession nos. YP_363434 and AAM36534). CTB7 also has similarity to a Xanthomonas campestris pv. zinniae oxidoreductase (accession no. AAY86766) which has recently been shown to be involved in cercosporin degradation (Taylor et al., 2006Down). We propose that the function of CTB7 in the cercosporin biosynthetic pathway is probably to catalyse a hydration or reduction step during ring closure to form the polyketomethylene skeleton of cercosporin prior to the methylation steps.

Biosynthetic gene clusters often include one or more genes for cellular self-protection in some fungi. For example, TRI12 is an efflux pump that is involved in self-protection against trichothecene in Fusarium sporotrichioides (Alexander et al., 1999Down), and TOXA is a putative HC-toxin transporter in Cochliobolus carbonum (Pitkin et al., 1996Down). Cercosporin is toxic to many cells due to the production of singlet oxygen; however, Cercospora species are very resistant to cercosporin (Daub et al., 2005Down). The mechanisms involved in cercosporin resistance have been attributed to the ability of Cercospora species to transiently reduce cercosporin, perhaps via membrane reductases (Daub et al., 1992Down, 2000Down; Leisman & Daub, 1992Down; Sollod et al., 1992Down). Recently, expression of a yeast FAD-dependent reductase in tobacco conferred resistance to cercosporin (Panagiotis et al., 2007Down). Despite the fact that the CTB5, CTB6 and CTB7 genes encode putative oxidoreductases, targeted gene disruption indicated that none of them is responsible for cercosporin self-resistance. Loss of the ability to synthesize cercosporin was the only phenotypic change caused by mutation of the CTB5, CTB6 or CTB7 genes. Conidiation of ctb5, ctb6 and ctb7 disruptants was not affected (data not shown). Finally, the ctb5, ctb6 and ctb7 disruptants produced fewer lesions compared to the wild-type on tobacco leaves, consistent with previous findings that cercosporin is an important virulence factor (Chen et al., 2007Down; Choquer et al., 2005Down, 2007; Dekkers et al., 2007Down).


    ACKNOWLEDGEMENTS
 
We wish to thank B. J. You and three anonymous reviewers for their valuable comments and suggestions. This work is supported by the Florida Agricultural Experiment Station.

Edited by: M. Tien


    REFERENCES
 TOP
 ABSTRACT
 INTRODUCTION
 METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Alexander, N. J., McCormick, S. P. & Hohn, T. M. (1999). TRI12, a trichothecene efflux pump from Fusarium sporotrichioides: gene isolation and expression in yeast. Mol Gen Genet 261, 977–984.[CrossRef][Medline]

August, P. R., Flickinger, M. C. & Sherman, D. H. (1994). Cloning and analysis of a locus (mcr) involved in mitomycin C resistance in Streptomyces lavendulae. J Bacteriol 176, 4448–4454.[Abstract/Free Full Text]

Bell, P. E., Nau, C. D., Brown, J. T., Konisky, J. & Kadner, R. J. (1990). Genetic suppression demonstrates interaction of TonB protein with outer membrane transport proteins in Escherichia coli. J Bacteriol 172, 3826–3829.[Abstract/Free Full Text]

Callahan, T. M., Rose, M. S., Meade, M. J., Ehrenshaft, M. & Upchurch, R. G. (1999). CFP, the putative cercosporin transporter of Cercospora kikuchii, is required for wild type cercosporin production, resistance, and virulence on soybean. Mol Plant Microbe Interact 12, 901–910.[Medline]

Chen, H., Lee, M.-H., Daub, M. E. & Chung, K.-R. (2007). Molecular analysis of the cercosporin biosynthetic gene cluster in Cercospora nicotianae. Mol Microbiol 64, 755–770

Choquer, M., Dekkers, K. A., Chen, H.-Q., Ueng, P. P., Daub, M. E. & Chung, K.-R. (2005). The CTB1 gene encoding a fungal polyketide synthase is required for cercosporin biosynthesis and fungal virulence of Cercospora nicotianae. Mol Plant Microbe Interact 18, 468–476.[Medline]

Choquer, M., Lee, M. H., Bau, H. J. & Chung, K. R. (2007). Deletion of a MFS transporter-like gene in Cercospora nicotianae reduces cercosporin toxin accumulation and fungal virulence. FEBS Lett 581, 489–494.[CrossRef][Medline]

Chung, K.-R. (2003). Involvement of calcium/calmodulin signaling in cercosporin toxin biosynthesis by Cercospora nicotianae. Appl Environ Microbiol 69, 1187–1196.[Abstract/Free Full Text]

Chung, K.-R., Jenns, A. E., Ehrenshaft, M. & Daub, M. E. (1999). A novel gene required for cercosporin toxin resistance in the fungus, Cercospora nicotianae. Mol Gen Genet 262, 382–389.[Medline]

Chung, K.-R., Shilts, T., Li, W. & Timmer, L. W. (2002). Engineering a genetic transformation system for Colletotrichum acutatum, the causal fungus of lime anthracnose and postbloom fruit drop. FEMS Microbiol Lett 213, 33–39.[CrossRef][Medline]

Chung, K.-R., Daub, M. E., Kuchler, K. & Schüller, C. (2003a). The CRG1 gene required for resistance to the singlet oxygen-generating cercosporin toxin in Cercospora nicotianae encodes a putative fungal transcription factor. Biochem Biophys Res Commun 302, 302–310.[CrossRef][Medline]

Chung, K.-R., Ehrenshaft, M., Wetzel, D. K. & Daub, M. E. (2003b). Cercosporin- deficient mutants by plasmid tagging in the asexual fungus Cercospora nicotianae. Mol Genet Genomics 270, 103–113.[CrossRef][Medline]

Daub, M. E. (1982). Peroxidation of tobacco membrane lipids by the photosensitizing toxin, cercosporin. Plant Physiol 69, 1361–1364.[Abstract/Free Full Text]

Daub, M. E. & Briggs, S. P. (1983). Changes in tobacco cell membrane composition and structure caused by the fungal toxin, cercosporin. Plant Physiol 71, 763–766.[Abstract/Free Full Text]

Daub, M. E. & Ehrenshaft, M. (2000). The photoactivated Cercospora toxin cercosporin: contributions to plant disease and fundamental biology. Annu Rev Phytopathol 38, 461–490.[CrossRef][Medline]

Daub, M. E. & Hangarter, R. P. (1983). Production of singlet oxygen and superoxide by the fungal toxin, cercosporin. Plant Physiol 73, 855–857.[Abstract/Free Full Text]

Daub, M. E., Leisman, G. B., Clark, R. A. & Bowden, E. F. (1992). Reduced detoxification as a mechanism of fungal resistance to singlet-oxygen-generating photosensitizers. Proc Natl Acad Sci U S A 89, 9588–9592.[Abstract/Free Full Text]

Daub, M. E., Li, M., Bilski, P. & Chignell, C. F. (2000). Dihydrocercosporin singlet oxygen production and subcellular localization: a possible defense against cercosporin phototoxicity in Cercospora. Photochem Photobiol 71, 135–140.[CrossRef][Medline]

Daub, M. E., Herrero, S. & Chung, K.-R. (2005). Photoactivated perylenequinone toxins in fungal pathogenesis of plants. FEMS Microbiol Lett 252, 197–206.[CrossRef][Medline]

Dekkers, K. L., You, B.-J., Gowda, V. S., Liao, H.-L., Lee, M.-H., Bau, H.-J., Ueng, P. P. & Chung, K.-R. (2007). The Cercospora nicotianae gene encoding dual O-methyltransferase and FAD-dependent monooxygenase domains mediates cercosporin toxin biosynthesis. Fungal Genet Biol 44, 444–454.[CrossRef][Medline]

Ehrenshaft, M. & Upchurch, R. G. (1991). Isolation of light-enhanced cDNAs of Cercospora kikuchii. Appl Environ Microbiol 57, 2671–2676.[Abstract/Free Full Text]

Ehrenshaft, M., Jenns, A. E., Chung, K.-R. & Daub, M. E. (1998). SOR1, a gene required for photosensitizer and singlet oxygen resistance in Cercospora fungi, is highly conserved in divergent organisms. Mol Cell 1, 603–609.[CrossRef][Medline]

Ehrenshaft, M., Bilski, P., Li, M. Y., Chignell, C. F. & Daub, M. E. (1999). A highly conserved sequence is a novel gene involved in de novo vitamin B6 biosynthesis. Proc Natl Acad Sci U S A 96, 9374–9378.[Abstract/Free Full Text]

Goffeau, A., Barrell, B. G., Bussey, H., Davis, R. W., Dujon, B., Feldmann, H., Galibert, F., Hoheisel, J. D., Jacq, C. & other authors (1996). Life with 6000 genes. Science 274, 546–547.[Abstract/Free Full Text]

Huttner, W. B. (1988). Tyrosine sulfation and the secretary pathway. Annu Rev Physiol 50, 363–376.[CrossRef][Medline]

Jenns, A. E. & Daub, M. E. (1995). Characterization of mutants of Cercospora nicotianae sensitive to the toxin cercosporin. Phytopathology 85, 906–912.[CrossRef]

Jenns, A. E., Daub, M. E. & Upchurch, R. G. (1989). Regulation of cercosporin accumulation in culture by medium and temperature manipulation. Phytopathology 79, 213–219.[CrossRef]

Keller, N. P., Turner, G. & Bennett, J. W. (2005). Fungal secondary metabolism – from biochemistry to genomics. Nat Rev Microbiol 3, 937–947.[CrossRef][Medline]

Kuyama, S. & Tamura, T. (1957). Cercosporin. A pigment of Cercospora kikuchii Matsumoto et Tomoyasu. II. Physical and chemical properties of cercosporin and its derivatives. J Am Chem Soc 79, 5725–5729.[CrossRef]

Leisman, G. B. & Daub, M. E. (1992). Singlet oxygen yields, optical properties, and phototoxicity of reduced derivatives of the photosensitizer cercosporin. Photochem Photobiol 55, 373–379.[CrossRef]

Okubo, A., Yamazaki, S. & Fuwa, K. (1975). Biosynthesis of cercosporin. Agric Biol Chem 39, 1173–1175.

Panagiotis, M., Kritonas, K., Irini, N. O., Kiriaki, C., Nicolaos, P. & Athanasios, T. (2007). Expression of the yeast cpd1 gene in tobacco confers resistance to the fungal toxin cercosporin. Biomol Eng 24, 245–251.[CrossRef][Medline]

Pitkin, J. W., Panaccione, D. G. & Walton, J. D. (1996). A putative cyclic peptide efflux pump encoded by the TOXA gene of the plant-pathogenic fungus Cochliobolus carbonum. Microbiology 142, 1557–1565.[Abstract/Free Full Text]

Rule, G. S., Pratt, E. A., Chin, C. C., Wold, F. & Ho, C. (1985). Overproduction and nucleotide sequence of the respiratory D-lactate dehydrogenase of Escherichia coli. J Bacteriol 161, 1059–1068.[Abstract/Free Full Text]

Schafer, W. (1994). Molecular mechanisms of fungal pathogenicity to plants. Annu Rev Phytopathol 32, 461–477.

Shim, W.-B. & Dunkle, L. D. (2003). CZK3, a MAP kinase kinase kinase homolog in Cercospora zeae-maydis, regulates cercosporin biosynthesis, fungal development, and pathogenesis. Mol Plant Microbe Interact 16, 760–768.[Medline]

Sollod, C. C., Jenns, A. J. & Daub, M. E. (1992). Cell surface redox potential as a mechanism of defense against photosensitizers in fungi. Appl Environ Microbiol 58, 444–449.[Abstract/Free Full Text]

Sweigard, J. A., Chumley, F. C., Carroll, A. M., Farrall, L. & Valent, B. (1997). A series of vectors for fungal transformation. Fungal Genet Newsl 44, 52–53.

Taylor, T. V., Mitchell, T. K. & Daub, M. E. (2006). An oxidoreductase is involved in cercosporin degradation by the bacterium Xanthomonas campestris pv. zinniae. Appl Environ Microbiol 72, 6070–6078.[Abstract/Free Full Text]

Upchurch, R. G., Walker, D. C., Rollins, J. A., Ehrenshaft, M. & Daub, M. E. (1991). Mutants of Cercospora kikuchii altered in cercosporin synthesis and pathogenicity. Appl Environ Microbiol 57, 2940–2945.[Abstract/Free Full Text]

van den Heuvel, R. H. H., Fraaije, M. W., Mattevi, A. & van Berkel, W. J. H. (2000). Asp-170 is crucial for the redox properties of vanillyl-alcohol oxidase. J Biol Chem 275, 14799–14808.[Abstract/Free Full Text]

Walton, J. D. (1996). Host-selective toxins: agents of compatibility. Plant Cell 8, 1723–1733.[CrossRef][Medline]

Yamazaki, S. & Ogawa, T. (1972). The chemistry and stereochemistry of cercosporin. Agric Biol Chem 36, 1707–1718.

Yamazaki, S., Okube, A., Akiyama, Y. & Fuwa, K. (1975). Cercosporin, a novel photodynamic pigment isolated from Cercospora kikuchii. Agric Biol Chem 39, 287–288.

Received 22 February 2007; revised 3 April 2007; accepted 17 April 2007.



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