|
|
||||||||

1 Microbiology and Immunology, A. T. Still University of Health Sciences, Kirksville, MO 63501, USA
2 Microbiology Group, Department of Biological Sciences, Illinois State University, Normal, IL 61790, USA
Correspondence
V. K. Singh
vsingh{at}atsu.edu
| ABSTRACT |
|---|
|
|
|---|
Present address: Department of Biotechnology, Thammasat University, Pathum Thaini 12121, Thailand.
| INTRODUCTION |
|---|
|
|
|---|
Heat-shock proteins (Hsps) that are molecular chaperones play important roles in bacterial stress tolerance. The molecular genetics and expression of these conserved Hsps have been most extensively studied in Escherichia coli and Bacillus subtilis. In E. coli, expression of Hsps is regulated by the alternative sigma factor 32 (
32), which is encoded by the rpoH gene (Mogk et al., 1999
; Yura et al., 2000
). Hsps provide major protection against cytoplasmic protein damage. In addition to
32 in E. coli, an alternative sigma factor,
E, also protects proteins from misfolding in the extracytoplasmic compartment under extreme heat stress (Yura et al., 2000
).
In Bac. subtilis, at least four classes of Hsps have been identified based on their regulatory mechanisms. Class I Hsps comprise the classical Hsps that are encoded by genes of the groES/EL and dnaK operons, and cellular levels of these proteins are controlled by the HrcA repressor (Schulz & Schumann, 1996
). Class II Hsps are
B dependent, and are induced by heat and other stresses (Schulz & Schumann, 1996
). Class III Hsps are Clp proteases/ATPases, and are typically under the control of the transcriptional repressor CtsR (Derre et al., 1999
). The class IV Hsps are encoded by genes that are not controlled by HrcA,
B or CtsR (Helmann et al., 2001
).
In S. aureus, the Hsp100/Clp ATPases have been extensively studied in recent years, and they have been shown to play important roles in stress tolerance, intracellular replication in eukaryotic epithelial cells, biofilm formation, expression of extracellular toxins, and pathogenicity in a murine model of infection (Chatterjee et al., 2005
; Frees et al., 2003
, 2004
; Michel et al., 2006
). Surprisingly, in contrast, the S. aureus GroES/EL and DnaK proteins have not been studied to this depth. DnaK and GroES/GroEL belong to a family of Hsps found in all organisms (Craig, 1985
); these Hsps have been highly conserved during evolution, indicating their important role in cellular metabolism (Maguire et al., 2002
). These Hsps are molecular chaperones and proteases that are synthesized in elevated amounts during sublethal heat and other stress conditions. They prevent misfolding and aggregation of proteins, and promote their refolding and proper assembly under normal and stress conditions (Checa & Viale, 1997
; Craig, 1985
; Diamant & Goloubinoff, 1998
; Hartl, 1996
; Hubbard & Sander, 1991
; Walter & Buchner, 2002
). The Hsps bind and release hydrophobic segments of an unfolded polypeptide chain in an ATP-hydrolytic reaction cycle (Hartl, 1996
; Walter & Buchner, 2002
).
Several studies have indicated an altered expression of staphylococcal GroEL and DnaK homologues under various environmental growth conditions (Qoronfleh et al., 1990
). These proteins are induced during infection of epithelial cells under conditions that do not involve thermal stress (Qoronfleh et al., 1998
), suggesting involvement of these proteins in the infection process. Additionally, sera from endocarditis patients have antibodies against these Hsps (Qoronfleh et al., 1993
). These Hsps have also assumed significance in antibiotic action, as they are induced under cell-wall-active antibiotic stress in S. aureus (Singh et al., 2001a
; Utaida et al., 2003
).
S. aureus dnaK has been predicted to be part of an operon consisting of at least five genes: hrcA–grpE–dnaK–dnaJ–prmA (Gill et al., 2005
; Kuroda et al., 2001
; Ohta et al., 1994
). This genomic organization is similar to the first five genes of a heptacistronic message observed in Bac. subtilis (Homuth et al., 1997
). It has been recently reported that the S. aureus dnaK, as well as the groEL operon, are subjected to dual negative regulation by CtsR and HrcA (Chastanet et al., 2003
). However, S. aureus is able to overcome this repression during growth at higher temperatures and in other stress conditions (Chastanet et al., 2003
). Beyond these studies, the roles of proteins encoded by the dnaK locus in S. aureus physiology are poorly understood. To begin to elucidate these roles, a knockout mutant of the dnaK gene in S. aureus was constructed. The findings of this study suggest critical roles for the staphylococcal dnaK locus in protection from heat, oxidative and antibiotic stress, in autolysis and pigmentation, and in survival in a mouse host.
| METHODS |
|---|
|
|
|---|
|
Construction of a dnaK mutant in S. aureus.
To create a dnaK mutant, primers P1 (5'-GCTGTAGTTCAAGATGATAACCC-3') and P2 (5'-CAGAGCCATTGAATCCTTGTC-3') were used to amplify a 2.4 kb DNA fragment, using chromosomal DNA from S. aureus strain COL as the template. The amplicon encompassing the entire dnaK gene, 164 bp upstream, and 391 bp downstream, was cloned into plasmid pCR2.1 (Invitrogen). A HindIII fragment of approximately 2.2 kb was excised from this construct, and subcloned into the vector pTZ18R (Mead et al., 1986
). A 432 bp DNA fragment was excised from the resultant construct pTZ18R-dnaK by digestion with EcoRV, and replaced with a 1.4 kb kanamycin-resistance cassette (Gutierrez et al., 1996
). The vector pTZ18R cannot replicate in Gram-positive bacteria, and the plasmid-disrupted dnaK construct pTZ-dnaK-kan was used as a suicide vector to transform S. aureus strain RN4220 via electroporation (Schenk & Laddaga, 1992
). The transformants were selected on TSA plates containing kanamycin. The selection resulted in a single crossover, and integration of the entire construct into the S. aureus chromosome. Phage 80
was propagated on these transformants, and used to resolve the mutation in the dnaK gene in S. aureus by performing transduction outcrosses, as described previously (Singh & Moskovitz, 2003
; Singh et al., 2001b
). The transductants were confirmed for a mutation in the dnaK gene using PCR and Southern blotting. For genetic complementation of the dnaK mutant, a 6.4 kb DNA fragment was PCR amplified using primers P5 (5'-GGTACCTTCTTTGACTGAGAGAATGG-3') and P6 (5'-TCTAGAGCAACCACTCATATTTGTCA-3'), S. aureus COL genomic DNA as a template, and EXL DNA Polymerase (Stratagene). Restriction sites (underlined) were included in the primers to facilitate subcloning of the amplified fragments. The amplicon represents a fragment starting 340 nt upstream of the hrcA gene and 285 nt downstream of the prmA gene that was cloned to the KpnI and XbaI sites of a shuttle plasmid pCU1 (Augustin et al., 1992
), and subsequently transferred to the dnaK mutant of S. aureus strain COL.
Growth kinetics of the wild-type S. aureus and its isogenic dnaK mutant under stress.
Mid-exponential-phase cultures (OD600 0.6) were diluted 50-fold in a nephelo culture flask (Wheaton) containing 50 ml fresh TSB, with a flask-to-medium volume ratio of 6 : 1. In parallel flasks, the following stress conditions were imposed through appropriate modifications of TSB: 8.8 mM H2O2, 4 % (v/v) ethanol, low pH (pH 4.5), high pH (pH 10.0) and NaCl (2.5 M). Growth was then followed by measurement of OD600 spectrophotometrically. These stress conditions were chosen based on prior studies (Singh & Moskovitz, 2003
; Singh et al., 2001a
, 2001b
; Utaida et al., 2003
), or on pilot studies where significant growth inhibition was observed for wild-type bacteria.
Viability and thermotolerance of S. aureus exposed to different stresses.
For induction of thermotolerance, mid-exponential-phase cultures (OD600 0.6) were diluted 50-fold in fresh TSB, and placed at 37 °C until the OD600 reached 0.3. The cultures were then divided into two parts, and one was maintained at 37 °C, while the other was incubated at 48 °C for 30 min. Both flasks were then shifted to 60 °C, and after 0, 5, and 10 min, aliquots of the cultures were quickly transferred to ice, diluted in TSB, plated on TSA, incubated at 37 °C for 48 h, and counted for viable colonies.
Determinations of susceptibility of the dnaK mutant to antibiotics and H2O2.
The MICs for the wild-type and the dnaK mutant of S. aureus strain COL were determined as described (Pfeltz et al., 2000
), using 96-well microtitre plates containing twofold serial dilutions of oxacillin, meticillin and H2O2. Mid-exponential-phase wild-type and dnaK mutant staphylococcal cells were then added to these dilutions, to a final concentration of 5x105 c.f.u. ml–1. The plates were incubated at 37 °C for 48 h, and the lowest concentration of antibiotic or H2O2 with no apparent visible growth was considered to be the MIC.
RNA extraction and Northern hybridization.
An overnight culture of S. aureus strain COL was diluted 100-fold in TSB, and grown at 37 °C until the OD600 reached 0.3. The cultures were divided into four parts, and subjected to various stress conditions. For heat stress, the culture was shifted to 43 °C. Oxacillin stress was imposed by the addition of this antibiotic at a final concentration of 1.2 mg ml–1. Oxidative stress was imposed by the addition of H2O2 to a final concentration of 15 mM. The control culture was maintained at 37 °C. Cultures were stressed for 10 min. Bacterial cells were harvested by centrifugation, resuspended in 1.0 ml RNAlater (Ambion), and incubated overnight at 4 °C to inactivate RNases. Cells were washed with PBS, recovered by centrifugation, resuspended in 1.0 ml RNA-Bee (Tel-Test), and broken using 0.1 mm silica/zirconium beads in a BioSpec Mini-Beadbeater by subjecting the cell suspension to three cycles of bead beating (30 s each, with 1 min breaks of cells on ice). The method was adapted from a procedure to extract RNA from Mycobacterium tuberculosis cells, as described (Talaat et al., 2002
). Total RNA was chloroform extracted from the cell-free supernatant, and precipitated by the addition of 2-propanol (50 % v/v). The resulting RNA was treated with DNase I (Ambion), and purified by affinity chromatography using the RNeasy kit (Qiagen). Subsequently, equal amounts of RNA (10 µg) from each sample were separated during 1.2 % denaturing agarose gel electrophoresis, and transferred to a nylon membrane. The 6.4 kb DNA fragment from the construct pCU-dnaK was gel purified, radiolabelled using the Prime-a-Gene labelling system (Promega) in the presence of [
-32P]dATP [specific activity >3000 Ci mmol–1 (>111 TBq mmol–1); MP Biochemicals], and used to probe the membrane. The scanned Northern blot as a JPEG image was analysed with ImageJ 1.6 software, which is a public domain Java image processing program (http://rsb.info.nih.gov/ij) (Abramoff et al., 2004
)
Persistence of S. aureus strain SH1000 and its isogenic dnaK mutant during oxacillin treatment.
Overnight cultures of the wild-type S. aureus strain SH1000 and its isogenic dnaK mutant were diluted 1 : 1000 in fresh TSB, and incubated at 37 °C with shaking (150 r.p.m.) to an OD600 of 0.5. Both cultures were subsequently treated for 16 h at 37 °C with 10 µg oxacillin ml–1. Total viable counts in both cultures before and after oxacillin treatment were performed by serial dilution and plating. The surviving fraction was calculated by dividing the number of viable organisms subsequent to oxacillin treatment by the number of viable organisms before antibiotic treatment.
Whole-cell autolysis assays.
Autolysis assays were performed as previously described (Pfeltz et al., 2000
). Briefly, wild-type and dnaK mutant cultures of S. aureus COL were grown to an OD600 of 1.0 at 37 °C in PYK medium (0.5 % bacto peptone, 0.5 % yeast extract, 0.3 % K2HPO4, pH 7.2). After one wash with cold water, cells were resuspended to an initial density of 1.2 in 0.05 M Tris/HCl buffer, pH 7.2, containing 0.05 % Triton X-100. The flasks were incubated at 37 °C with shaking (150 r.p.m.), and subsequent readings were taken every 30 min for 6 h.
Carotenoid production in wild-type S. aureus and its isogenic dnaK mutant.
Overnight cultures (5.0 ml) were pelleted by centrifugation, and the pellets were washed twice in 5.0 ml sterile water. The final supernatant was removed, and the pellets were then weighed. The pigments were extracted with methanol, as described (Marshall & Wilmoth, 1981
). The volume of the final carotenoid-containing extract from 0.25 g of cells was placed in petroleum ether, and the A462 was obtained with a Beckman DU-70 spectrophotometer.
Survival of the wild-type and the dnaK mutants in a murine systemic infection model.
Wild-type S. aureus strain COL and its isogenic dnaK mutant were grown to mid-exponential phase (OD600 0.6) in TSB. Bacterial cells from each culture were harvested by centrifugation, washed three times with 1 % TSB, and resuspended in 1 % TSB. Cell viability in the suspension was determined by serial dilution and plating. A mixture of wild-type and dnaK mutant cells, containing a total of 5x108 c.f.u. ml–1, was prepared (76/24 % mixture of mutant/wild-type) in 1 % TSB, and 0.2 ml of this suspension was injected into the peritoneal cavity of Swiss white Hla(ICR)CVF female mice (16–20 g) (Hilltop Lab Animals Inc.) with a 26 gauge needle fitted to a 1 ml syringe, following published procedures with appropriate modifications (Schwan et al., 2006
). At 4, 8 and 30 h, the mice were euthanized by CO2 asphyxiation. The peritoneum was lavaged with 1 ml 1 % TSB, and the liver and spleen were aseptically removed from the peritoneal cavity. Excised livers and spleens were homogenized in 2 and 1 ml 1 % TSB, respectively, using a glass tissue grinder fitted with a glass pestle. Peritoneal lavages and the tissue homogenates were serially diluted, plated on TSA, and allowed to grow overnight by incubation at 37 °C. The bacterial colonies were subsequently patched on TSA plates containing kanamycin. The number of bacterial colonies growing in the presence of kanamycin was used to calculate the fraction of dnaK mutants relative to wild-type in the bacterial population in the infected tissues. The ratio of surviving mutant was subsequently compared with the percentage of mutants in the mixed culture used to inject mice.
| RESULTS |
|---|
|
|
|---|
|
|
|
|
|
|
Whole-cell autolysis of the dnaK mutant
The effect of mutation in the dnaK gene on autolytic activity was also examined. The autolysis experiments showed a slower rate of autolysis of the dnaK mutant cells compared with wild-type S. aureus strain COL (Fig. 5b
). The wild-type S. aureus strain COL was more resistant to oxacillin in liquid culture compared with the dnaK mutant, and was able to grow to a higher cell density (Fig. 5a
). However, the wild-type S. aureus culture started to lyse, and the rate of cell lysis was more pronounced compared with the derivative dnaK mutant cells (Fig. 5a
). After 3 days' incubation, the oxacillin-treated wild-type S. aureus COL culture was completely clear, while the dnaK mutant culture stayed relatively turbid (data not shown). The data suggest altered autolysin production/processing in the dnaK mutant compared with the wild-type S. aureus.
Transcriptional analysis of the S. aureus dnaK locus
Comparison of the growth kinetics of the dnaK mutant with wild-type S. aureus suggests that DnaK plays a role in the tolerance of heat, oxidative and antibiotic stress. To determine if any of these stress conditions induced the expression of the dnaK gene, Northern blot analysis experiments were carried on total RNA from the control and S. aureus cells exposed to these stress conditions. A probe representing the entire dnaK locus genes hybridized with two transcripts of approximately 5.8 and 3.5 kb. Both bands were induced in response to heat and oxacillin stresses (Fig. 2a
, lanes 3 and 4; Fig. 2b
). An increased production of dnaK locus transcripts in response to heat shock is consistent with an earlier report (Ohta et al., 1994
). However, these transcripts were not detected at an elevated level in a more recent global transcription profiling study aimed to characterize the staphylococcal heat shock, cold shock, stringent and SOS responses (Anderson et al., 2006
). In the present study also, stress conditions such as oxidative stress had no effect on the expression of dnaK locus genes (Fig. 2a
, lane 2; Fig. 2b
). As expected, the corresponding bands were absent in the mutant bacteria (Fig. 2a
, lane 5; Fig. 2b
), but the level of expression of both transcripts was considerably higher in the case of the mutant complemented with dnaK locus genes on a high-copy plasmid, even under normal growth conditions (Fig. 2a
, lane 6; Fig. 2b
).
Mutation in dnaK alters pigmentation of the S. aureus cells
The S. aureus dnaK mutant colonies appeared less pigmented compared with the wild-type COL in broth culture, and during its growth on TSA plates. The S. aureus strain SH1000 produces more pigment than the S. aureus strain COL, and the role of dnaK in the production of pigment was more apparent in strain SH1000. In a quantitative assay, the wild-type S. aureus strain SH1000 was estimated to produce over threefold more pigment than the dnaK mutant strain (mean A462 0.546±0.148 vs 0.178±0.008, respectively; values are means of three independent experiments).
Mutation in dnaK alters survival of S. aureus in vivo
To determine the role of dnaK in S. aureus pathogenesis, mice were injected intraperitoneally with a mixture of wild-type COL and dnaK mutant bacteria. In these studies, the dnaK mutant fraction was deliberately kept at a higher level than the wild-type S. aureus to determine subtle changes in the ability of the mutant to survive in vivo. The infected mice were killed at 4, 8 and 30 h after injection. No visible abscess was detected in any of the mice, and the bacterial cell number [total c.f.u. (g tissue)–1] showed a gradual decrease with time (Fig. 6a
). Interestingly, the fraction of dnaK mutant cells recovered from the spleen and liver in infected mice decreased with time; however, the fraction of wild-type cells increased with time (Fig. 6b, c
). Since both types of bacteria were gradually removed, the increased recovery of the wild-type cells compared with the dnaK mutant cells is suggestive of a role for DnaK in survival of S. aureus in vivo, rather than it being a mere advantage of growth of the wild-type compared with the dnaK mutant at 37 °C.
|
| DISCUSSION |
|---|
|
|
|---|
To study the physiological roles of the DnaK system in S. aureus, a dnaK deletion mutant was constructed. Insertional inactivation of the dnaK gene slowed the growth of S. aureus at 37 °C (Fig. 3b
), and a temperature of 43 °C was observed to be lethal for the mutant, but not for the wild-type S. aureus (Fig. 3c
). These observations are consistent with findings in Bac. subtilis, E. coli, Brucella suis, Listeria monocytogenes and other bacterial species, where inactivation of dnaK has been shown to result in poor growth at higher temperatures (Bukau & Walker, 1990
; Hanawa et al., 1999
; Kohler et al., 2002
; Schulz et al., 1995
). In addition to heat, the DnaK system has also been implicated to have a role in other stress conditions, such as ethanol, low pH, salt and oxidative stress (Mogk et al., 1998
; Echave et al., 2002
; Periago et al., 2002
). However, no difference in response to ethanol, acid, alkali or osmotic stress was observed in the case of a dnaK mutant compared with the wild-type S. aureus strain COL (data not shown). Interestingly, a dnaK mutant of the S. aureus strain 8325-4, which is defective in SigB (Kullik et al., 1998
), was more sensitive to acid stress compared with its isogenic wild-type (data not shown). This response, however, was not observed in the case of the dnaK mutants of S. aureus strains SH1000 and COL (data not shown). S. aureus strain SH1000 is a derivative of strain 8325-4, in which the SigB defect has been corrected (Horsburgh et al., 2002
). Additional stress response defects in a dnaK mutant of S. aureus strain 8325-4 are probably suggestive of a coordination of various staphylococcal stress factors in dealing with adverse environmental conditions.
Interestingly, mutation in dnaK led to significant impairment in the oxidative stress response of the mutant compared to the wild-type S. aureus strain COL. Oxidative stress is known to cause lethal damage to cellular DNA, lipids and proteins. In the case of proteins, oxidative stress leads to carbonylation of amino acids and oxidation of methionine and cysteine-bound sulfur atoms (Requena et al., 2001
; Stadtman et al., 2003
), and this may lead to protein unfolding (Berlett & Stadtman, 1997
). This study suggests that functional DnaK protein refolding machinery is critical for the staphylococcal oxidative stress response. There was no apparent induction in the expression of the dnaK locus under the conditions of oxidative stress (Fig. 2
, lane 3). This suggests that the basal level production of DnaK is sufficient to provide protection for cells against oxidative damage. Similar results have been reported in Bru. suis, where DnaK has been shown to be important in the resistance of the organism to oxidative stress, as well as to acidic pH (Kohler et al., 2002
). In L. monocytogenes however, a dnaK mutant has been shown to be more susceptible to acidic conditions than the wild-type strain, but not more susceptible to oxidative stress (Hanawa et al., 1999
).
The mutation in dnaK increased the susceptibility of meticillin-resistant strain COL to the cell-wall-active antibiotics oxacillin and meticillin (Table 2
). In the case of the meticillin-susceptible strain SH1000, deletion of dnaK did not reduce the oxacillin MIC, but it led to a significantly reduced survival after oxacillin treatment. Challenge of meticillin-susceptible S. aureus by cell wall-active antibiotics induces a cell wall stress stimulon (Kuroda et al., 2003
; Utaida et al., 2003
; Wilkinson et al., 2005
). Genes induced include genes encoding enzymes involved in cell-wall biosynthesis, and molecular chaperones and proteases. A number of these genes are controlled by the VraSR two-component regulatory system (Kuroda et al., 2003
). Inactivation of VraSR results in reduced oxacillin MICs in meticillin-resistant S. aureus (Boyle-Vavra et al., 2006
; Gardete et al., 2006
). VraSR has been proposed to be a sentinel sensing perturbations in peptidoglycan biosynthesis, functioning to control the expression of genes involved in generation of a resistance phenotype. The decreased oxacillin MIC of the dnaK mutant of strain COL, and the decreased persistence of the dnaK mutant of strain SH1000, suggest that protein damage does occur as a result of challenge with cell-wall-active antibiotics, and that DnaK plays a role in dealing with these damaged proteins.
Surprisingly, the dnaK mutants of S. aureus produced fewer carotenoids during growth on TSA plates, and also in liquid culture, compared with their wild-type counterparts. Reduced pigmentation was more evident in case of the S. aureus strain SH1000. Pale yellow orange colonies were observed for the dnaK mutant, compared with bright golden-yellow colonies for the wild-type cells, on TSA plates. Although it is unclear how the DnaK deletion is affecting pigmentation in the S. aureus mutant cells, a recent study has shown that S. aureus mutants with disrupted carotenoid biosynthesis are more susceptible to oxidative killing and killing by neutrophils, and are less pathogenic (Liu et al., 2005
).
When the dnaK mutants of S. aureus were tested for their survival in mice, the mutants showed significantly reduced survival compared with their wild-type counterpart. Several features of the dnaK mutant may account for this reduced survival. Their susceptibility to oxidative stress may account for their increased vulnerability to the host phagocytic cells. Reduced pigmentation also may, in part, be responsible for reduced survival in a host, in view of the findings of a correlation between carotenoid production and staphylococcal pathogenesis (Liu et al., 2005
). Additionally, autolysins have also been demonstrated to be important in staphylococcal pathogenesis (Mani et al., 1994
). At this point, although it is debatable whether DnaK should be viewed as a staphylococcal virulence factor, this study suggests that its presence confers an advantage during the initial stages of infection in a host.
In conclusion, inactivation of dnaK in S. aureus impairs the growth and survival of S. aureus at elevated temperatures, under oxidative stress, in the presence of cell-wall-active antibiotics and inside a host. Mutation also impairs carotenoid production and cell autolysis.
| ACKNOWLEDGEMENTS |
|---|
Edited by: T. Msadek
| REFERENCES |
|---|
|
|
|---|
Anderson, K. L., Roberts, C., Disz, T., Vonstein, V., Hwang, K., Overbeek, R., Olson, P. D., Projan, S. J. & Dunman, P. M. (2006). Characterization of the Staphylococcus aureus heat shock, cold shock, stringent, and SOS responses and their effects on log-phase mRNA turnover. J Bacteriol 188, 6739–6756.
Augustin, J., Rosenstein, R., Wieland, B., Schneider, U., Schnell, N., Engelke, G., Entian, K. D. & Gotz, F. (1992). Genetic analysis of epidermin biosynthetic genes and epidermin-negative mutants of Staphylococcus epidermidis. Eur J Biochem 204, 1149–1154.[Medline]
Bal, A. M. & Gould, I. M. (2005). Antibiotic resistance in Staphylococcus aureus and its relevance in therapy. Expert Opin Pharmacother 6, 2257–2269.[CrossRef][Medline]
Berlett, B. S. & Stadtman, E. R. (1997). Protein oxidation in aging, disease, and oxidative stress. J Biol Chem 272, 20313–20316.
Boyle-Vavra, S., Yin, S. & Daum, R. S. (2006). The VraS/VraR two-component regulatory system required for oxacillin resistance in community-acquired methicillin-resistant Staphylococcus aureus. FEMS Microbiol Lett 262, 163–171.[Medline]
Bukau, B. & Walker, G. C. (1990). Mutations altering heat shock specific subunit of RNA polymerase suppress major cellular defects of E. coli mutants lacking the DnaK chaperone. EMBO J 9, 4027–4036.[Medline]
Chastanet, A., Fert, J. & Msadek, T. (2003). Comparative genomics reveal novel heat shock regulatory mechanisms in Staphylococcus aureus and other Gram-positive bacteria. Mol Microbiol 47, 1061–1073.[CrossRef][Medline]
Chatterjee, I., Becker, P., Grundmeier, M., Bischoff, M., Somerville, G. A., Peters, G., Sinha, B., Harraghy, N., Proctor, R. A. & Herrmann, M. (2005). Staphylococcus aureus ClpC is required for stress resistance, aconitase activity, growth recovery, and death. J Bacteriol 187, 4488–4496.
Checa, S. K. & Viale, A. M. (1997). The 70-kDa heat-shock protein/DnaK chaperone system is required for the productive folding of ribulose-biphosphate carboxylase subunits in Escherichia coli. Eur J Biochem 248, 848–855.[Medline]
Chopra, I. (2003). Antibiotic resistance in Staphylococcus aureus: concerns, causes and cures. Expert Rev Anti Infect Ther 1, 45–55.[CrossRef][Medline]
Craig, E. A. (1985). The heat shock response. CRC Crit Rev Biochem 18, 239–280.[Medline]
Cui, L., Iwamoto, A., Lian, J. Q., Neoh, H. M., Maruyama, T., Horikawa, Y. & Hiramatsu, K. (2006). Novel mechanism of antibiotic resistance originating in vancomycin-intermediate Staphylococcus aureus. Antimicrob Agents Chemother 50, 428–438.
Derre, I., Rapoport, G. & Msadek, T. (1999). CtsR, a novel regulator of stress and heat shock response, controls clp and molecular chaperone gene expression in Gram-positive bacteria. Mol Microbiol 31, 117–131.[CrossRef][Medline]
Diamant, S. & Goloubinoff, P. (1998). Temperature-controlled activity of DnaK-DnaJ-GrpE chaperones: protein-folding arrest and recovery during and after heat shock depends on the substrate protein and the GrpE concentration. Biochemistry 37, 9688–9694.[CrossRef][Medline]
Echave, P., Esparza-Ceron, M. A., Cabiscol, E., Tamarit, J., Ros, J., Membrillo-Hernandez, J. & Lin, E. C. (2002). DnaK dependence of mutant ethanol oxidoreductases evolved for aerobic function and protective role of the chaperone against protein oxidative damage in Escherichia coli. Proc Natl Acad Sci U S A 99, 4626–4631.
Frees, D., Qazi, S. N., Hill, P. J. & Ingmer, H. (2003). Alternative roles of ClpX and ClpP in Staphylococcus aureus stress tolerance and virulence. Mol Microbiol 48, 1565–1578.[CrossRef][Medline]
Frees, D., Chastanet, A., Qazi, S., Sorensen, K., Hill, P., Msadek, T. & Ingmer, H. (2004). Clp ATPases are required for stress tolerance, intracellular replication and biofilm formation in Staphylococcus aureus. Mol Microbiol 54, 1445–1462.[CrossRef][Medline]
Gardete, S., Wu, S. W., Gill, S. & Tomasz, A. (2006). Role of VraSR in antibiotic resistance and antibiotic-induced stress response in Staphylococcus aureus. Antimicrob Agents Chemother 50, 3424–3434.
Gill, S. R., Fouts, D. E., Archer, G. L., Mongodin, E. F., Deboy, R. T., Ravel, J., Paulsen, I. T., Kolonay, J. F., Brinkac, L. & other authors (2005). Insights on evolution of virulence and resistance from the complete genome analysis of an early methicillin-resistant Staphylococcus aureus strain and a biofilm-producing methicillin-resistant Staphylococcus epidermidis strain. J Bacteriol 187, 2426–2438.
Gutierrez, J. A., Crowley, P. J., Brown, D. P., Hillman, J. D., Youngman, P. & Bleiweis, A. S. (1996). Insertional mutagenesis and recovery of interrupted genes of Streptococcus mutans by using transposon Tn917: preliminary characterization of mutants displaying acid sensitivity and nutritional requirements. J Bacteriol 178, 4166–4175.
Hanawa, T., Fukuda, M., Kawakami, H., Hirano, H., Kamiya, S. & Yamamoto, T. (1999). The Listeria monocytogenes DnaK chaperone is required for stress tolerance and efficient phagocytosis with macrophages. Cell Stress Chaperones 4, 118–128.[Medline]
Harrison, C. (2003). GrpE, a nucleotide exchange factor for DnaK. Cell Stress Chaperones 8, 218–224.[CrossRef][Medline]
Hartl, F. U. (1996). Molecular chaperones in cellular protein folding. Nature 381, 571–579.[CrossRef][Medline]
Helmann, J. D., Wu, M. F., Kobel, P. A., Gamo, F. J., Wilson, M., Morshedi, M. M., Navre, M. & Paddon, C. (2001). Global transcriptional response of Bacillus subtilis to heat shock. J Bacteriol 183, 7318–7328.
Homuth, G., Masuda, S., Mogk, A., Kobayashi, Y. & Schumann, W. (1997). The dnaK operon of Bacillus subtilis is heptacistronic. J Bacteriol 179, 1153–1164.
Horsburgh, M. J., Aish, J. L., White, I. J., Shaw, L., Lithgow, J. K. & Foster, S. J. (2002). SigmaB modulates virulence determinant expression and stress resistance: characterization of a functional rsbU strain derived from Staphylococcus aureus 8325–4. J Bacteriol 184, 5457–5467.
Hubbard, T. J. & Sander, C. (1991). The role of heat-shock and chaperone proteins in protein folding: possible molecular mechanisms. Protein Eng 4, 711–717.
Kohler, S., Ekaza, E., Paquet, J. Y., Walravens, K., Teyssier, J., Godfroid, J. & Liautard, J. P. (2002). Induction of dnaK through its native heat shock promoter is necessary for intramacrophagic replication of Brucella suis. Infect Immun 70, 1631–1634.
Korch, S. B. & Hill, T. M. (2006). Ectopic overexpression of wild-type and mutant hipA genes in Escherichia coli: effects on macromolecular synthesis and persister formation. J Bacteriol 188, 3826–3836.
Kreiswirth, B. N., Lofdahl, S., Betley, M. J., O'Reilly, M., Schlievert, P. M., Bergdoll, M. S. & Novick, R. P. (1983). The toxic shock syndrome exotoxin structural gene is not detectably transmitted by a prophage. Nature 305, 709–712.[CrossRef][Medline]
Kullik, I., Giachino, P. & Fuchs, T. (1998). Deletion of the alternative sigma factor sigmaB in Staphylococcus aureus reveals its function as a global regulator of virulence genes. J Bacteriol 180, 4814–4820.
Kuroda, M., Ohta, T., Uchiyama, I., Baba, T., Yuzawa, H., Kobayashi, I., Cui, L., Oguchi, A., Aoki, K. & other authors (2001). Whole genome sequencing of meticillin-resistant Staphylococcus aureus. Lancet 357, 1225–1240.[CrossRef][Medline]
Kuroda, M., Kuroda, H., Oshima, T., Takeuchi, F., Mori, H. & Hiramatsu, K. (2003). Two-component system VraSR positively modulates the regulation of cell-wall biosynthesis pathway in Staphylococcus aureus. Mol Microbiol 49, 807–821.[CrossRef][Medline]
Liberek, K., Marszalek, J., Ang, D., Georgopoulos, C. & Zylicz, M. (1991). Escherichia coli DnaJ and GrpE heat shock proteins jointly stimulate ATPase activity of DnaK. Proc Natl Acad Sci U S A 88, 2874–2878.
Liu, G. Y., Essex, A., Buchanan, J. T., Datta, V., Hoffman, H. M., Bastian, J. F., Fierer, J. & Nizet, V. (2005). Staphylococcus aureus golden pigment impairs neutrophil killing and promotes virulence through its antioxidant activity. J Exp Med 202, 209–215.
Lyczak, J. B., Cannon, C. L. & Pier, G. B. (2002). Lung infections associated with cystic fibrosis. Clin Microbiol Rev 15, 194–222.
Maguire, M., Coates, A. R. & Henderson, B. (2002). Chaperonin 60 unfolds its secrets of cellular communication. Cell Stress Chaperones 7, 317–329.[CrossRef][Medline]
Mani, N., Baddour, L. M., Offutt, D. Q., Vijaranakul, U., Nadakavukaren, M. J. & Jayaswal, R. K. (1994). Autolysis-defective mutant of Staphylococcus aureus: pathological considerations, genetic mapping, and electron microscopic studies. Infect Immun 62, 1406–1409.
Marshall, J. H. & Wilmoth, G. J. (1981). Pigments of Staphylococcus aureus, a series of triterpenoid carotenoids. J Bacteriol 147, 900–913.
McCarty, J. S., Buchberger, A., Reinstein, J. & Bukau, B. (1995). The role of ATP in the functional cycle of the DnaK chaperone system. J Mol Biol 249, 126–137.[CrossRef][Medline]
Mead, D. A., Szczesna-Skorupa, E. & Kemper, B. (1986). Single-stranded DNA blue T7 promoter plasmids: a versatile tandem promoter system for cloning and protein engineering. Protein Eng 1, 67–74.
Michel, A., Agerer, F., Hauck, C. R., Herrmann, M., Ullrich, J., Hacker, J. & Ohlsen, K. (2006). Global regulatory impact of ClpP protease of Staphylococcus aureus on regulons involved in virulence, oxidative stress response, autolysis, and DNA repair. J Bacteriol 188, 5783–5796.
Mogk, A., Völker, A., Engelmann, S., Hecker, M., Schumann, W. & Völker, U. (1998). Nonnative proteins induce expression of the Bacillus subtilis CIRCE regulon. J Bacteriol 180, 2895–2900.
Mogk, A., Tomoyasu, T., Goloubinoff, P., Rudiger, S., Roder, D., Langen, H. & Bukau, B. (1999). Identification of thermolabile Escherichia coli proteins: prevention and reversion of aggregation by DnaK and ClpB. EMBO J 18, 6934–6949.[CrossRef][Medline]
Novick, R. P. (1991). Genetic systems in staphylococci. Methods Enzymol 204, 587–636.[Medline]
Ohta, T., Saito, K., Kuroda, M., Honda, K., Hirata, H. & Hayashi, H. (1994). Molecular cloning of two new heat shock genes related to the hsp70 genes in Staphylococcus aureus. J Bacteriol 176, 4779–4783.
Periago, P. M., van Schaik, W., Abee, T. & Wouters, J. A. (2002). Identification of proteins involved in the heat stress response of Bacillus cereus ATCC 14579. Appl Environ Microbiol 68, 3486–3495.
Pfeltz, R. F., Singh, V. K., Schmidt, J. L., Batten, M. A., Baranyk, C. S., Nadakavukaren, M. J., Jayaswal, R. K. & Wilkinson, B. J. (2000). Characterization of passage-selected vancomycin-resistant Staphylococcus aureus strains of diverse parental backgrounds. Antimicrob Agents Chemother 44, 294–303.
Projan, S. J. & Novick, R. P. (1997). The molecular basis of pathogenicity. In The Staphylococci in Human Disease, pp. 55–81. Edited by K. B. Crossley & G. L. Archer. New York: Churchill Livingstone.
Qoronfleh, M. W., Streips, U. N. & Wilkinson, B. J. (1990). Basic features of the staphylococcal heat shock response. Antonie Van Leeuwenhoek 58, 79–86.[CrossRef][Medline]
Qoronfleh, M. W., Weraarchakul, W. & Wilkinson, B. J. (1993). Antibodies to a range of Staphylococcus aureus and Escherichia coli heat shock proteins in sera from patients with S. aureus endocarditis. Infect Immun 61, 1567–1570.
Qoronfleh, M. W., Bortner, C. A., Schwartzberg, P. & Wilkinson, B. J. (1998). Enhanced levels of Staphylococcus aureus stress protein GroEL and DnaK homologs early in infection of human epithelial cells. Infect Immun 66, 3024–3027.
Requena, J. R., Chao, C. C., Levine, R. L. & Stadtman, E. R. (2001). Glutamic and aminoadipic semialdehydes are the main carbonyl products of metal-catalyzed oxidation of proteins. Proc Natl Acad Sci U S A 98, 69–74.
Schenk, S. & Laddaga, R. A. (1992). Improved method for electroporation of Staphylococcus aureus. FEMS Microbiol Lett 73, 133–138.[Medline]
Schito, G. C. (2006). The importance of the development of antibiotic resistance in Staphylococcus aureus. Clin Microbiol Infect 12 (Suppl. 1), 3–8.
Schulz, A. & Schumann, W. (1996). hrcA, the first gene of the Bacillus subtilis dnaK operon encodes a negative regulator of class I heat shock genes. J Bacteriol 178, 1088–1093.
Schulz, A., Tzschaschel, B. & Schumann, W. (1995). Isolation and analysis of mutants of the dnaK operon of Bacillus subtilis. Mol Microbiol 15, 421–429.[CrossRef][Medline]
Schwan, W. R., Lehmann, L. & McCormick, J. (2006). Transcriptional activation of the Staphylococcus aureus putP gene by low-proline–high-osmotic conditions and during infection of murine and human tissues. Infect Immun 74, 399–409.
Singh, V. K. & Moskovitz, J. (2003). Multiple methionine sulfoxide reductase genes in Staphylococcus aureus: expression of activity and roles in tolerance of oxidative stress. Microbiology 149, 2739–2747.
Singh, V. K., Jayaswal, R. K. & Wilkinson, B. J. (2001a). Cell wall-active antibiotic induced proteins of Staphylococcus aureus identified using a proteomic approach. FEMS Microbiol Lett 199, 79–84.[Medline]
Singh, V. K., Moskovitz, J., Wilkinson, B. J. & Jayaswal, R. K. (2001b). Molecular characterization of a chromosomal locus in Staphylococcus aureus that contributes to oxidative defence and is highly induced by the cell-wall-active antibiotic oxacillin. Microbiology 147, 3037–3045.
Stadtman, E. R., Moskovitz, J. & Levine, R. L. (2003). Oxidation of methionine residues of proteins: biological consequences. Antioxid Redox Signal 5, 577–582.[CrossRef][Medline]
Stewart, P. S. (2002). Mechanisms of antibiotic resistance in bacterial biofilms. Int J Med Microbiol 292, 107–113.[CrossRef][Medline]
Sutherland, R. & Rolinson, G. N. (1964). Characteristics of methicillin-resistant staphylococci. J Bacteriol 87, 887–899.
Talaat, A. M., Howard, S. T., Hale, W. T., Lyons, R., Garner, H. & Johnston, S. A. (2002). Genomic DNA standards for gene expression profiling in Mycobacterium tuberculosis. Nucleic Acids Res 30, e104
Utaida, S., Dunman, P. M., Macapagal, D., Murphy, E., Projan, S. J., Singh, V. K., Jayaswal, R. K. & Wilkinson, B. J. (2003). Genome-wide transcriptional profiling of the response of Staphylococcus aureus to cell-wall-active antibiotics reveals a cell-wall-stress stimulon. Microbiology 149, 2719–2732.
Walter, S. & Buchner, J. (2002). Molecular chaperones – cellular machines for protein folding. Angew Chem Int Ed Engl 41, 1098–1113.[CrossRef]
Wilkinson, B. J., Muthaiyan, A. & Jayaswal, R. K. (2005). The cell wall stress stimulon of Staphylococcus aureus and other Gram-positive bacteria. Curr Med Chem Anti-Infect Agents 4, 259–276.[CrossRef]
Winter, J. & Jakob, U. (2004). Beyond transcription – new mechanisms for the regulation of molecular chaperones. Crit Rev Biochem Mol Biol 39, 297–317.[CrossRef][Medline]
Yanisch-Perron, C., Vieira, J. & Messing, J. (1985). Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33, 103–119.[CrossRef][Medline]
Yura, T., Kanemori, M. & Morita, M. T. (2000). The heat shock response: regulation and function. In Bacterial Stress Response, pp. 3–18. Edited by G. Storz & R. Hengge-Aronis. Washington, DC: American Society for Microbiology.
Received 13 February 2007;
revised 3 May 2007;
accepted 9 May 2007.
This article has been cited by other articles:
![]() |
V. K. Singh, D. S. Hattangady, E. S. Giotis, A. K. Singh, N. R. Chamberlain, M. K. Stuart, and B. J. Wilkinson Insertional Inactivation of Branched-Chain {alpha}-Keto Acid Dehydrogenase in Staphylococcus aureus Leads to Decreased Branched-Chain Membrane Fatty Acid Content and Increased Susceptibility to Certain Stresses Appl. Envir. Microbiol., October 1, 2008; 74(19): 5882 - 5890. [Abstract] [Full Text] [PDF] |
||||
![]() |
S. Hansen, K. Lewis, and M. Vulic Role of Global Regulators and Nucleotide Metabolism in Antibiotic Tolerance in Escherichia coli Antimicrob. Agents Chemother., August 1, 2008; 52(8): 2718 - 2726. [Abstract] [Full Text] [PDF] |
||||
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| HOME | HELP | FEEDBACK | SUBSCRIPTIONS | ARCHIVE | SEARCH | TABLE OF CONTENTS |
| INT J SYST EVOL MICROBIOL | MICROBIOLOGY | J GEN VIROL |
| J MED MICROBIOL | ALL SGM JOURNALS | |