From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later, by V. Barbe, S. Cruveiller, F. Kunst, P. Lenoble, G. Meurice, A. Sekowska, D. Vallenet, T. Wang, I. Moszer, C. Médigue and A. Danchin
Microbiology vol. 155, part 6, pp. 1758 - 1775
Table S1. tRNAs series observed in the original sequence of B. subtilis 168. The upper part reports tRNA series found in rDNA cluster spacers, whereas the lower part shows those that are found elsewhere on the chromosome. Subseries that are shared by several clusters are indicated by coloured boxes. The triad specific to the triple cluster rDNA I, H and G is indicated in a red box. [Excel file] (36 kb)
Table S2. Syntactic feature updates in the B. subtilis 168 new genome sequence. The table identifies (comparing with the previously available sequence and annotation of B. subtilis 168): 1, new genes; 2, sequence corrections which resulted in gene fusion or fission; 3, genes with N-terminal and C-terminal variations in the protein sequences; 4, genes with amino acid variations in their core sequence. [Excel file] (146 kb)
Table S3. Regions of genomic plasticity in the genome of B. subtilis 168. Regions predicted by MaGe are marked in brown when also containing genomic island signatures, and in blue otherwise. Predictions not seen using MaGe are marked in green. Phage regions are highlighted in yellow. The predicted genomic regions are marked with 'Y' when they have been described previously. [Excel file] (73 kb)
Table S4. Correspondence analysis of the amino acid distribution in the proteome of B. subtilis 168. The table lists the proteins according to their belonging to the integral inner-membrane (IIMP) class or to the bulk protein class. A reliability factor tells whether ascribing a protein to class I or class II has a strong relevance or not. [Excel file] (567 kb)
Copyright © 2009 Society for General Microbiology.
